STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHY45416.1COG:COG1183: Phosphatidylserine synthase [Lipid metabolism]; Pfam:PF01066:CDP-alcohol phosphatidyltransferase; Pfam:PF01066:CDP-alcohol phosphatidyltransferase; PIRSF:PIRSF000851:Phosphatidylcholine synthase Pcs. (259 aa)    
Predicted Functional Partners:
AHY46465.1
pgsA: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; TIGRFAM:TIGR00560:CDP-diacylglycerol--glycerol-3- phosphate 3-phosphatidyltransferase; COG:COG0558: Phosphatidylglycerophosphate synthase [Lipid metabolism]; Pfam:PF01066:CDP-alcohol phosphatidyltransferase; PIRSF:PIRSF000847:CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; ProSitePatterns:PS00379:CDP-alcohol phosphatidyltransferase;KEGG: 00564; MetaCyc: PWY-5668; UniPathway: UPA00084; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
 
 
 0.921
AHY45436.1
pssA: CDP-diacylglycerol-serine O-phosphatidyltransferase; TIGRFAM:TIGR00473:CDP-diacylglycerol--serine O-phosphatidyltransferase; COG:COG1183: Phosphatidylserine synthase [Lipid metabolism]; Pfam:PF01066:CDP-alcohol phosphatidyltransferase; ProSitePatterns:PS00379:CDP-alcohol phosphatidyltransferase;KEGG: 00260; KEGG: 00564; MetaCyc: PWY-5669; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
  
  
  0.913
AHY46692.1
COG:COG0575: CDP-diglyceride synthetase [Lipid metabolism]; Pfam:PF01148:Phosphatidate cytidylyltransferase; Pfam:PF01148:Phosphatidate cytidylyltransferase; ProSitePatterns:PS01315:Phosphatidate cytidylyltransferase; Belongs to the CDS family.
    
 0.912
AHY45542.1
COG:COG0558: Phosphatidylglycerophosphate synthase [Lipid metabolism]; Pfam:PF01066:CDP-alcohol phosphatidyltransferase; Pfam:PF01066:CDP-alcohol phosphatidyltransferase; ProSitePatterns:PS00379:CDP-alcohol phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
  
 
 0.909
AHY45415.1
COG:COG1363: Cellulase M and related proteins [Carbohydrate transport and metabolism]; Pfam:PF05343:Peptidase M42; Pfam:PF05343:Peptidase M42; PIRSF:PIRSF001123:Peptidase M42; SUPERFAMILY:SSF53187:No Description.
       0.601
AHY45417.1
Hypothetical protein; TIGRFAM:TIGR00369:Phenylacetic acid degradation-related domain; COG:COG2050: Uncharacterized protein possibly involved in aromatic compounds catabolism [Secondary metabolites biosynthesis transport and catabolism]; Pfam:PF03061:Thioesterase superfamily; SUPERFAMILY:SSF54637:No Description; unchar_dom_1.
       0.525
AHY45414.1
TIGRFAM:TIGR01426:UDP-glycosyltransferase, MGT; COG:COG1819: Glycosyl transferases related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms]; Pfam:PF00201:UDP-glucuronosyl/UDP-glucosyltransferase; SUPERFAMILY:SSF53756:No Description;KEGG: 00051; KEGG: 00510; KEGG: 00512; KEGG: 00513; KEGG: 00514; KEGG: 00522; KEGG: 00524; KEGG: 00533; KEGG: 00540; KEGG: 00550; KEGG: 00561; KEGG: 00563; KEGG: 00600; KEGG: 00601; KEGG: 00603; KEGG: 00604; KEGG: 00906; KEGG: 00908; KEGG: 00941; KEGG: 00942; KEGG: 00944; KEGG: 00945; KEGG: 00965.
     
 0.463
AHY46132.1
Glycosyl transferase family 2; COG:COG2433: Uncharacterized conserved protein [Function unknown]; Pfam:PF13704:Glycosyl transferase family 2; SUPERFAMILY:SSF52540:P-loop containing nucleoside triphosphate hydrolase.
  
     0.450
AHY46133.1
COG:COG0463: Glycosyltransferases involved in cell wall biogenesis [Cell envelope biogenesis outer membrane]; Pfam:PF13704:Glycosyl transferase family 2; SUPERFAMILY:SSF53448:No Description.
  
     0.445
AHY47682.1
Hypothetical protein; COG:COG1944: Uncharacterized conserved protein [Function unknown]; Pfam:PF02624:YcaO-like; Pfam:PF02624:YcaO-like.
  
     0.441
Your Current Organism:
Rubrobacter radiotolerans
NCBI taxonomy Id: 42256
Other names: ATCC 51242, Arthrobacter radiotolerans, CIP 106991, DSM 46359, DSM 5868, IAM 12072, IFO 14777, JCM 2153, NBRC 14777, R. radiotolerans, strain P-1
Server load: low (28%) [HD]
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