STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHY45452.1COG:COG0614: ABC-type Fe3+-hydroxamate transport system periplasmic component [Inorganic ion transport and metabolism]; Pfam:PF01497:ABC transporter periplasmic binding domain; Pfam:PF01497:ABC transporter periplasmic binding domain; ProSiteProfiles:PS50983:ABC transporter periplasmic binding domain; SUPERFAMILY:SSF53807:No Description. (348 aa)    
Predicted Functional Partners:
AHY47673.1
COG:COG1120: ABC-type cobalamin/Fe3+-siderophores transport systems ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism]; Pfam:PF00005:ABC transporter-like; Pfam:PF00005:ABC transporter-like; ProSitePatterns:PS00211:ABC transporter, conserved site; ProSiteProfiles:PS50893:ABC transporter-like; SMART:SM00382:AAA+ ATPase domain; SUPERFAMILY:SSF52540:P-loop containing nucleoside triphosphate hydrolase.
 
 
 0.939
AHY47676.1
COG:COG0609: ABC-type Fe3+-siderophore transport system permease component [Inorganic ion transport and metabolism]; Pfam:PF01032:ABC transporter, permease protein; Pfam:PF01032:ABC transporter, permease protein; SUPERFAMILY:SSF81345:No Description; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 
 0.920
AHY47675.1
COG:COG0609: ABC-type Fe3+-siderophore transport system permease component [Inorganic ion transport and metabolism]; Pfam:PF01032:ABC transporter, permease protein; Pfam:PF01032:ABC transporter, permease protein; SUPERFAMILY:SSF81345:No Description; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 
 0.913
AHY45453.1
COG:COG0614: ABC-type Fe3+-hydroxamate transport system periplasmic component [Inorganic ion transport and metabolism]; Pfam:PF01497:ABC transporter periplasmic binding domain; Pfam:PF01497:ABC transporter periplasmic binding domain; ProSiteProfiles:PS50983:ABC transporter periplasmic binding domain; SUPERFAMILY:SSF53807:No Description.
 
    
0.511
AHY45451.1
Hypothetical Protein; Ab initio prediction:Prodigal:2.60; ProSiteProfiles:PS50903:Rubredoxin-like domain; SUPERFAMILY:SSF57802:No Description.
       0.463
AHY45769.1
COG:COG0672: High-affinity Fe2+/Pb2+ permease [Inorganic ion transport and metabolism]; Pfam:PF03239:Iron permease FTR1; Pfam:PF03239:Iron permease FTR1.
   
  
 0.445
AHY45450.1
Hypothetical protein; COG:COG3360: Uncharacterized conserved protein [Function unknown]; Pfam:PF07311:Dodecin; Pfam:PF07311:Dodecin; SUPERFAMILY:SSF89807:Dodecin.
       0.404
Your Current Organism:
Rubrobacter radiotolerans
NCBI taxonomy Id: 42256
Other names: ATCC 51242, Arthrobacter radiotolerans, CIP 106991, DSM 46359, DSM 5868, IAM 12072, IFO 14777, JCM 2153, NBRC 14777, R. radiotolerans, strain P-1
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.