STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHY45482.1COG:COG2814: Arabinose efflux permease [Carbohydrate transport and metabolism]; Pfam:PF07690:Major facilitator superfamily; Pfam:PF07690:Major facilitator superfamily; PRINTS:PR01035:Tetracycline resistance protein, TetA/multidrug resistance protein MdtG; ProSiteProfiles:PS50850:Major facilitator superfamily domain; SUPERFAMILY:SSF103473:Major facilitator superfamily domain, general substrate transporter. (396 aa)    
Predicted Functional Partners:
AHY45483.1
NADH(P)-binding; COG:COG0451: Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis outer membrane / Carbohydrate transport and metabolism]; Pfam:PF13460:NADH(P)-binding; SUPERFAMILY:SSF51735:No Description.
 
     0.698
AHY45484.1
COG:COG5006: Predicted permease DMT superfamily [General function prediction only]; Pfam:PF00892:Drug/metabolite transporter; Pfam:PF00892:Drug/metabolite transporter; SUPERFAMILY:SSF103481:No Description.
 
     0.529
AHY45481.1
Glycosidase; COG:COG0366: Glycosidases [Carbohydrate transport and metabolism]; Pfam:PF00128:Glycosyl hydrolase, family 13, catalytic domain; Pfam:PF00128:Glycosyl hydrolase, family 13, catalytic domain; SMART:SM00642:Glycosyl hydrolase, family 13, subfamily, catalytic domain; SUPERFAMILY:SSF51445:Glycoside hydrolase, superfamily.
       0.504
AHY45480.1
COG:COG0604: NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]; Pfam:PF00107:Alcohol dehydrogenase, C-terminal; Pfam:PF00107:Alcohol dehydrogenase, C-terminal; SMART:SM00829:Polyketide synthase, enoylreductase; SUPERFAMILY:SSF51735:No Description.
       0.494
AHY45475.1
TIGRFAM:TIGR02456:Trehalose synthase/alpha-amylase, N-terminal; COG:COG0366: Glycosidases [Carbohydrate transport and metabolism]; Pfam:PF00128:Glycosyl hydrolase, family 13, catalytic domain; SMART:SM00642:Glycosyl hydrolase, family 13, subfamily, catalytic domain; SUPERFAMILY:SSF51445:Glycoside hydrolase, superfamily;KEGG: 00500; MetaCyc: PWY-2622; treS_nterm.
     
 0.466
AHY47428.1
COG:COG2807: Cyanate permease [Inorganic ion transport and metabolism]; Pfam:PF07690:Major facilitator superfamily; Pfam:PF07690:Major facilitator superfamily; ProSiteProfiles:PS50850:Major facilitator superfamily domain; SUPERFAMILY:SSF103473:Major facilitator superfamily domain, general substrate transporter.
  
     0.426
AHY47724.1
Drug resistance MFS transporter, drugH+ antiporter-2 (14 Spanner) (DHA2) family; TIGRFAM:TIGR00711:Drug resistance transporter EmrB/QacA subfamily; COG:COG2814: Arabinose efflux permease [Carbohydrate transport and metabolism]; Pfam:PF07690:Major facilitator superfamily; PRINTS:PR01036:Tetracycline resistance protein TetB/drug resistance transporter; ProSiteProfiles:PS50850:Major facilitator superfamily domain; SUPERFAMILY:SSF103473:Major facilitator superfamily domain, general substrate transporter; efflux_EmrB.
  
   
 0.408
Your Current Organism:
Rubrobacter radiotolerans
NCBI taxonomy Id: 42256
Other names: ATCC 51242, Arthrobacter radiotolerans, CIP 106991, DSM 46359, DSM 5868, IAM 12072, IFO 14777, JCM 2153, NBRC 14777, R. radiotolerans, strain P-1
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.