STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHY45515.1COG:COG1216: Predicted glycosyltransferases [General function prediction only]; Pfam:PF13641:Glycosyltransferase like family 2; Pfam:PF13641:Glycosyltransferase like family 2; SUPERFAMILY:SSF53448:No Description. (301 aa)    
Predicted Functional Partners:
AHY45518.1
rmlD: dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose.
 
  
 0.879
AHY45516.1
COG:COG1216: Predicted glycosyltransferases [General function prediction only]; Pfam:PF00535:Glycosyl transferase, family 2; Pfam:PF00535:Glycosyl transferase, family 2; SUPERFAMILY:SSF53448:No Description.
 
    
0.838
AHY45519.1
COG:COG0451: Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis outer membrane / Carbohydrate transport and metabolism]; Pfam:PF13460:NADH(P)-binding; Pfam:PF13460:NADH(P)-binding; SUPERFAMILY:SSF51735:No Description.
 
    0.796
AHY46457.1
COG:COG1216: Predicted glycosyltransferases [General function prediction only]; Pfam:PF00535:Glycosyl transferase, family 2; SUPERFAMILY:SSF53448:No Description.
 
    0.791
AHY45742.1
TIGRFAM:TIGR03025:Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; COG:COG2148: Sugar transferases involved in lipopolysaccharide synthesis [Cell envelope biogenesis outer membrane]; Pfam:PF02397:Bacterial sugar transferase; EPS_sugtrans.
 
  
 0.740
AHY47001.1
TIGRFAM:TIGR03022:Undecaprenyl-phosphate galactose phosphotransferase, WbaP; COG:COG2148: Sugar transferases involved in lipopolysaccharide synthesis [Cell envelope biogenesis outer membrane]; Pfam:PF02397:Bacterial sugar transferase; WbaP_sugtrans.
 
  
 0.721
AHY45514.1
rmlC: dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family.
 
  
 0.691
AHY45463.1
COG:COG1682: ABC-type polysaccharide/polyol phosphate export systems permease component [Carbohydrate transport and metabolism / Cell envelope biogenesis outer membrane]; Pfam:PF01061:ABC-2 type transporter; Pfam:PF01061:ABC-2 type transporter; PIRSF:PIRSF006648:No Description; ProSiteProfiles:PS51012:ABC-2.
 
  
 0.658
AHY45447.1
Sulfotransferase family; COG:COG3551: Uncharacterized protein conserved in bacteria [Function unknown]; Pfam:PF13469:Sulfotransferase family; SUPERFAMILY:SSF52540:P-loop containing nucleoside triphosphate hydrolase.
  
 0.638
AHY47922.1
TIGRFAM:TIGR03965:Putative mycofactocin biosynthesis glycosyltransferase; COG:COG1215: Glycosyltransferases probably involved in cell wall biogenesis [Cell envelope biogenesis outer membrane]; Pfam:PF00535:Glycosyl transferase, family 2; SUPERFAMILY:SSF53448:No Description; mycofact_glyco.
 
   
 0.598
Your Current Organism:
Rubrobacter radiotolerans
NCBI taxonomy Id: 42256
Other names: ATCC 51242, Arthrobacter radiotolerans, CIP 106991, DSM 46359, DSM 5868, IAM 12072, IFO 14777, JCM 2153, NBRC 14777, R. radiotolerans, strain P-1
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.