STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHY45529.1COG:COG1691: NCAIR mutase (PurE)-related proteins [General function prediction only]; Pfam:PF00731:N5-carboxyaminoimidazole ribonucleotide mutase PurE domain; Pfam:PF00731:N5-carboxyaminoimidazole ribonucleotide mutase PurE domain; SMART:SM01001:N5-carboxyaminoimidazole ribonucleotide mutase PurE domain; SUPERFAMILY:SSF52255:N5-carboxyaminoimidazole ribonucleotide mutase PurE domain. (272 aa)    
Predicted Functional Partners:
AHY46322.1
TIGRFAM:TIGR00268:Conserved hypothetical protein CHP00268; COG:COG1606: ATP-utilizing enzymes of the PP-loop superfamily [General function prediction only]; Pfam:PF00733:Asparagine synthase; PIRSF:PIRSF006661:Conserved hypothetical protein CHP00268; SUPERFAMILY:SSF52402:No Description.
  
 0.972
AHY48000.1
TIGRFAM:TIGR00299:Uncharacterised protein family UPF0272; COG:COG1641: Uncharacterized conserved protein [Function unknown]; Pfam:PF01969:Uncharacterised protein family UPF0272.
 
  
 0.910
AHY47178.1
COG:COG3875: Uncharacterized conserved protein [Function unknown]; Pfam:PF09861:Domain of unknown function DUF2088.
 
  
 0.811
AHY47927.1
COG:COG0310: ABC-type Co2+ transport system permease component [Inorganic ion transport and metabolism]; Pfam:PF01891:Cobalamin (vitamin B12) biosynthesis CbiM family; Pfam:PF01891:Cobalamin (vitamin B12) biosynthesis CbiM family.
  
    0.634
AHY45530.1
TIGRFAM:TIGR03717:Integral membrane protein YjbE; COG:COG0861: Membrane protein TerC possibly involved in tellurium resistance [Inorganic ion transport and metabolism]; Pfam:PF03741:Integral membrane protein TerC; R_switched_YjbE.
       0.423
Your Current Organism:
Rubrobacter radiotolerans
NCBI taxonomy Id: 42256
Other names: ATCC 51242, Arthrobacter radiotolerans, CIP 106991, DSM 46359, DSM 5868, IAM 12072, IFO 14777, JCM 2153, NBRC 14777, R. radiotolerans, strain P-1
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