Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AHY45540.1 | AHY45541.1 | RradSPS_0257 | RradSPS_0258 | COG:COG1994: Zn-dependent proteases [General function prediction only]; Pfam:PF02163:Peptidase M50; Pfam:PF02163:Peptidase M50. | Hypothetical Protein; Ab initio prediction:Prodigal:2.60. | 0.741 |
AHY45540.1 | AHY45542.1 | RradSPS_0257 | RradSPS_0259 | COG:COG1994: Zn-dependent proteases [General function prediction only]; Pfam:PF02163:Peptidase M50; Pfam:PF02163:Peptidase M50. | COG:COG0558: Phosphatidylglycerophosphate synthase [Lipid metabolism]; Pfam:PF01066:CDP-alcohol phosphatidyltransferase; Pfam:PF01066:CDP-alcohol phosphatidyltransferase; ProSitePatterns:PS00379:CDP-alcohol phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. | 0.485 |
AHY45540.1 | AHY45543.1 | RradSPS_0257 | RradSPS_0260 | COG:COG1994: Zn-dependent proteases [General function prediction only]; Pfam:PF02163:Peptidase M50; Pfam:PF02163:Peptidase M50. | Hypothetical Protein; Ab initio prediction:Prodigal:2.60. | 0.473 |
AHY45541.1 | AHY45540.1 | RradSPS_0258 | RradSPS_0257 | Hypothetical Protein; Ab initio prediction:Prodigal:2.60. | COG:COG1994: Zn-dependent proteases [General function prediction only]; Pfam:PF02163:Peptidase M50; Pfam:PF02163:Peptidase M50. | 0.741 |
AHY45541.1 | AHY45542.1 | RradSPS_0258 | RradSPS_0259 | Hypothetical Protein; Ab initio prediction:Prodigal:2.60. | COG:COG0558: Phosphatidylglycerophosphate synthase [Lipid metabolism]; Pfam:PF01066:CDP-alcohol phosphatidyltransferase; Pfam:PF01066:CDP-alcohol phosphatidyltransferase; ProSitePatterns:PS00379:CDP-alcohol phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. | 0.491 |
AHY45541.1 | AHY45543.1 | RradSPS_0258 | RradSPS_0260 | Hypothetical Protein; Ab initio prediction:Prodigal:2.60. | Hypothetical Protein; Ab initio prediction:Prodigal:2.60. | 0.491 |
AHY45542.1 | AHY45540.1 | RradSPS_0259 | RradSPS_0257 | COG:COG0558: Phosphatidylglycerophosphate synthase [Lipid metabolism]; Pfam:PF01066:CDP-alcohol phosphatidyltransferase; Pfam:PF01066:CDP-alcohol phosphatidyltransferase; ProSitePatterns:PS00379:CDP-alcohol phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. | COG:COG1994: Zn-dependent proteases [General function prediction only]; Pfam:PF02163:Peptidase M50; Pfam:PF02163:Peptidase M50. | 0.485 |
AHY45542.1 | AHY45541.1 | RradSPS_0259 | RradSPS_0258 | COG:COG0558: Phosphatidylglycerophosphate synthase [Lipid metabolism]; Pfam:PF01066:CDP-alcohol phosphatidyltransferase; Pfam:PF01066:CDP-alcohol phosphatidyltransferase; ProSitePatterns:PS00379:CDP-alcohol phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. | Hypothetical Protein; Ab initio prediction:Prodigal:2.60. | 0.491 |
AHY45542.1 | AHY45543.1 | RradSPS_0259 | RradSPS_0260 | COG:COG0558: Phosphatidylglycerophosphate synthase [Lipid metabolism]; Pfam:PF01066:CDP-alcohol phosphatidyltransferase; Pfam:PF01066:CDP-alcohol phosphatidyltransferase; ProSitePatterns:PS00379:CDP-alcohol phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. | Hypothetical Protein; Ab initio prediction:Prodigal:2.60. | 0.778 |
AHY45543.1 | AHY45540.1 | RradSPS_0260 | RradSPS_0257 | Hypothetical Protein; Ab initio prediction:Prodigal:2.60. | COG:COG1994: Zn-dependent proteases [General function prediction only]; Pfam:PF02163:Peptidase M50; Pfam:PF02163:Peptidase M50. | 0.473 |
AHY45543.1 | AHY45541.1 | RradSPS_0260 | RradSPS_0258 | Hypothetical Protein; Ab initio prediction:Prodigal:2.60. | Hypothetical Protein; Ab initio prediction:Prodigal:2.60. | 0.491 |
AHY45543.1 | AHY45542.1 | RradSPS_0260 | RradSPS_0259 | Hypothetical Protein; Ab initio prediction:Prodigal:2.60. | COG:COG0558: Phosphatidylglycerophosphate synthase [Lipid metabolism]; Pfam:PF01066:CDP-alcohol phosphatidyltransferase; Pfam:PF01066:CDP-alcohol phosphatidyltransferase; ProSitePatterns:PS00379:CDP-alcohol phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. | 0.778 |