STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHY45542.1COG:COG0558: Phosphatidylglycerophosphate synthase [Lipid metabolism]; Pfam:PF01066:CDP-alcohol phosphatidyltransferase; Pfam:PF01066:CDP-alcohol phosphatidyltransferase; ProSitePatterns:PS00379:CDP-alcohol phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. (223 aa)    
Predicted Functional Partners:
AHY46465.1
pgsA: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; TIGRFAM:TIGR00560:CDP-diacylglycerol--glycerol-3- phosphate 3-phosphatidyltransferase; COG:COG0558: Phosphatidylglycerophosphate synthase [Lipid metabolism]; Pfam:PF01066:CDP-alcohol phosphatidyltransferase; PIRSF:PIRSF000847:CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; ProSitePatterns:PS00379:CDP-alcohol phosphatidyltransferase;KEGG: 00564; MetaCyc: PWY-5668; UniPathway: UPA00084; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
     
 0.938
AHY45436.1
pssA: CDP-diacylglycerol-serine O-phosphatidyltransferase; TIGRFAM:TIGR00473:CDP-diacylglycerol--serine O-phosphatidyltransferase; COG:COG1183: Phosphatidylserine synthase [Lipid metabolism]; Pfam:PF01066:CDP-alcohol phosphatidyltransferase; ProSitePatterns:PS00379:CDP-alcohol phosphatidyltransferase;KEGG: 00260; KEGG: 00564; MetaCyc: PWY-5669; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
  
 
 0.934
AHY46692.1
COG:COG0575: CDP-diglyceride synthetase [Lipid metabolism]; Pfam:PF01148:Phosphatidate cytidylyltransferase; Pfam:PF01148:Phosphatidate cytidylyltransferase; ProSitePatterns:PS01315:Phosphatidate cytidylyltransferase; Belongs to the CDS family.
    
 0.932
AHY45416.1
COG:COG1183: Phosphatidylserine synthase [Lipid metabolism]; Pfam:PF01066:CDP-alcohol phosphatidyltransferase; Pfam:PF01066:CDP-alcohol phosphatidyltransferase; PIRSF:PIRSF000851:Phosphatidylcholine synthase Pcs.
  
 
 0.909
AHY45668.1
Competence/damage-inducible protein CinA N-terminal domain; TIGRFAM:TIGR00200:Competence-induced protein CinA; COG:COG1058: Predicted nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA [General function prediction only]; Pfam:PF02464:CinA, C-terminal; Hamap:MF_00226_B:Competence-induced protein CinA; PIRSF:PIRSF006728:Competence-induced protein CinA; SMART:SM00852:Molybdopterin binding domain; SUPERFAMILY:SSF142433:No Description; cinA_nterm.
  
  
 0.828
AHY45543.1
Hypothetical Protein; Ab initio prediction:Prodigal:2.60.
       0.778
AHY47686.1
COG:COG1260: Myo-inositol-1-phosphate synthase [Lipid metabolism]; Pfam:PF07994:Myo-inositol-1-phosphate synthase; Pfam:PF07994:Myo-inositol-1-phosphate synthase; PIRSF:PIRSF015578:Myo-inositol-1-phosphate synthase; SUPERFAMILY:SSF51735:No Description.
 
   
 0.727
AHY45664.1
COG:COG0438: Glycosyltransferase [Cell envelope biogenesis outer membrane]; Pfam:PF00534:Glycosyl transferase, family 1; Pfam:PF00534:Glycosyl transferase, family 1; SUPERFAMILY:SSF53756:No Description.
  
 0.681
AHY46710.1
Helix-turn-helix domain; COG:COG1426: Uncharacterized protein conserved in bacteria [Function unknown]; Pfam:PF13413:Helix-turn-helix domain.
  
    0.635
AHY47084.1
Transglycosylase SLT domain; COG:COG0741: Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) [Cell envelope biogenesis outer membrane]; Pfam:PF01464:Lytic transglycosylase-like, catalytic; ProSitePatterns:PS00922:Prokaryotic transglycosylase, active site; SUPERFAMILY:SSF53955:Lysozyme-like domain.
 
    0.591
Your Current Organism:
Rubrobacter radiotolerans
NCBI taxonomy Id: 42256
Other names: ATCC 51242, Arthrobacter radiotolerans, CIP 106991, DSM 46359, DSM 5868, IAM 12072, IFO 14777, JCM 2153, NBRC 14777, R. radiotolerans, strain P-1
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