STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHY45595.1COG:COG0640: Predicted transcriptional regulators [Transcription]; Pfam:PF01022:HTH ArsR-type DNA-binding domain; Pfam:PF01022:HTH ArsR-type DNA-binding domain; PRINTS:PR00778:HTH ArsR-type DNA-binding domain; ProSiteProfiles:PS50987:HTH ArsR-type DNA-binding domain; SMART:SM00418:HTH ArsR-type DNA-binding domain; SUPERFAMILY:SSF46785:No Description. (117 aa)    
Predicted Functional Partners:
AHY46422.1
COG:COG0640: Predicted transcriptional regulators [Transcription]; Pfam:PF12840:Helix-turn-helix domain; Pfam:PF12840:Helix-turn-helix domain; PRINTS:PR00778:HTH ArsR-type DNA-binding domain; ProSiteProfiles:PS50987:HTH ArsR-type DNA-binding domain; SMART:SM00418:HTH ArsR-type DNA-binding domain; SUPERFAMILY:SSF46785:No Description.
  
     0.698
AHY46980.1
Heavy metal translocating P-type ATPase; TIGRFAM:TIGR01525:Cation-transporting P-type ATPase, subfamily IB; COG:COG2217: Cation transport ATPase [Inorganic ion transport and metabolism]; Pfam:PF00122:P-type ATPase, A domain; PRINTS:PR00119:Cation-transporting P-type ATPase; ProSitePatterns:PS01047:Heavy-metal-associated, conserved site; ProSiteProfiles:PS50846:Heavy metal-associated domain, HMA; SUPERFAMILY:SSF56784:HAD-like domain; ATPase-IB_hvy.
 
  
 0.652
AHY45594.1
COG:COG0745: Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription]; Pfam:PF00072:Signal transduction response regulator, receiver domain; Pfam:PF00072:Signal transduction response regulator, receiver domain; ProSiteProfiles:PS50110:Signal transduction response regulator, receiver domain; SMART:SM00448:Signal transduction response regulator, receiver domain; SUPERFAMILY:SSF52172:CheY-like superfamily.
  
  
 0.495
AHY47880.1
Heavy metal translocating P-type ATPase; TIGRFAM:TIGR01525:Cation-transporting P-type ATPase, subfamily IB; COG:COG2217: Cation transport ATPase [Inorganic ion transport and metabolism]; Pfam:PF00702:HAD-like domain; PRINTS:PR00119:Cation-transporting P-type ATPase; ProSitePatterns:PS00154:P-type ATPase, phosphorylation site; SUPERFAMILY:SSF56784:HAD-like domain; ATPase-IB_hvy.
 
  
 0.481
AHY45596.1
Putative transposase of IS4/5 family (DUF4096); COG:COG3293: Transposase and inactivated derivatives [DNA replication recombination and repair]; Pfam:PF13340:Putative transposase IS4/IS5 family.
  
    0.445
AHY45597.1
Transposase DDE domain; COG:COG3293: Transposase and inactivated derivatives [DNA replication recombination and repair]; Pfam:PF13586:Transposase DDE domain.
  
    0.445
Your Current Organism:
Rubrobacter radiotolerans
NCBI taxonomy Id: 42256
Other names: ATCC 51242, Arthrobacter radiotolerans, CIP 106991, DSM 46359, DSM 5868, IAM 12072, IFO 14777, JCM 2153, NBRC 14777, R. radiotolerans, strain P-1
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.