STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHY45615.1Hypothetical Protein; Ab initio prediction:Prodigal:2.60. (98 aa)    
Predicted Functional Partners:
AHY45616.1
COG:COG1012: NAD-dependent aldehyde dehydrogenases [Energy production and conversion]; Pfam:PF00171:Aldehyde dehydrogenase domain; Pfam:PF00171:Aldehyde dehydrogenase domain; ProSitePatterns:PS00687:Aldehyde dehydrogenase, conserved site; SUPERFAMILY:SSF53720:Aldehyde/histidinol dehydrogenase; Belongs to the aldehyde dehydrogenase family.
       0.773
AHY45614.1
COG:COG3733: Cu2+-containing amine oxidase [Secondary metabolites biosynthesis transport and catabolism]; Pfam:PF01179:Copper amine oxidase, C-terminal; Pfam:PF01179:Copper amine oxidase, C-terminal; ProSitePatterns:PS01164:Copper amine oxidase; SUPERFAMILY:SSF49998:Copper amine oxidase, C-terminal.
       0.732
AHY45617.1
COG:COG2442: Uncharacterized conserved protein [Function unknown]; Pfam:PF04255:Protein of unknown function DUF433; SUPERFAMILY:SSF46689:Homeodomain-like.
       0.465
AHY45618.1
Hypothetical Protein; Ab initio prediction:Prodigal:2.60.
       0.465
Your Current Organism:
Rubrobacter radiotolerans
NCBI taxonomy Id: 42256
Other names: ATCC 51242, Arthrobacter radiotolerans, CIP 106991, DSM 46359, DSM 5868, IAM 12072, IFO 14777, JCM 2153, NBRC 14777, R. radiotolerans, strain P-1
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