STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHY45622.1COG:COG1231: Monoamine oxidase [Amino acid transport and metabolism]; Pfam:PF01593:Amine oxidase; Pfam:PF01593:Amine oxidase; PRINTS:PR00757:Flavin amine oxidase; SUPERFAMILY:SSF51905:No Description. (460 aa)    
Predicted Functional Partners:
AHY46234.1
COG:COG3424: Predicted naringenin-chalcone synthase [Secondary metabolites biosynthesis transport and catabolism]; Pfam:PF00195:Chalcone/stilbene synthase, N-terminal; Pfam:PF00195:Chalcone/stilbene synthase, N-terminal; PIRSF:PIRSF000451:Polyketide synthase, type III; ProSitePatterns:PS00441:Chalcone/stilbene synthase, active site; SUPERFAMILY:SSF53901:Thiolase-like.
  
 
 
 0.710
AHY45623.1
COG:COG0161: Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Coenzyme metabolism]; Pfam:PF00202:Aminotransferase class-III; Pfam:PF00202:Aminotransferase class-III; PIRSF:PIRSF000521:No Description; SUPERFAMILY:SSF53383:Pyridoxal phosphate-dependent transferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
     
 0.704
AHY46249.1
Deacetylase; COG:COG0123: Deacetylases including yeast histone deacetylase and acetoin utilization protein [Chromatin structure and dynamics / Secondary metabolites biosynthesis transport and catabolism]; Pfam:PF00850:Histone deacetylase domain; Pfam:PF00850:Histone deacetylase domain; PRINTS:PR01272:Acetoin utilisation ACUC protein; SUPERFAMILY:SSF52768:No Description.
   
 0.667
AHY46438.1
Deacetylase; COG:COG0123: Deacetylases including yeast histone deacetylase and acetoin utilization protein [Chromatin structure and dynamics / Secondary metabolites biosynthesis transport and catabolism]; Pfam:PF00850:Histone deacetylase domain; Pfam:PF00850:Histone deacetylase domain; PRINTS:PR01270:Histone deacetylase superfamily; SUPERFAMILY:SSF52768:No Description.
   
 0.667
AHY47825.1
Deacetylase; COG:COG0123: Deacetylases including yeast histone deacetylase and acetoin utilization protein [Chromatin structure and dynamics / Secondary metabolites biosynthesis transport and catabolism]; Pfam:PF00850:Histone deacetylase domain; Pfam:PF00850:Histone deacetylase domain; PRINTS:PR01270:Histone deacetylase superfamily; SUPERFAMILY:SSF52768:No Description.
   
 0.667
AHY45614.1
COG:COG3733: Cu2+-containing amine oxidase [Secondary metabolites biosynthesis transport and catabolism]; Pfam:PF01179:Copper amine oxidase, C-terminal; Pfam:PF01179:Copper amine oxidase, C-terminal; ProSitePatterns:PS01164:Copper amine oxidase; SUPERFAMILY:SSF49998:Copper amine oxidase, C-terminal.
  
  
 0.643
AHY45621.1
COG:COG0531: Amino acid transporters [Amino acid transport and metabolism]; Pfam:PF13520:Amino acid permease; PIRSF:PIRSF006060:Amino acid/polyamine transporter I; ProSiteProfiles:PS50283:Sodium/solute symporter.
 
   
 0.593
AHY46014.1
COG:COG1562: Phytoene/squalene synthetase [Lipid metabolism]; Pfam:PF00494:Squalene/phytoene synthase; Pfam:PF00494:Squalene/phytoene synthase; ProSitePatterns:PS01045:Squalene/phytoene synthase, conserved site; SUPERFAMILY:SSF48576:Terpenoid synthase.
   
  
 0.559
AHY45285.1
Dnan: DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiat [...]
   
    0.517
AHY46478.1
TIGRFAM:TIGR00229:PAS domain; COG:COG4585: Signal transduction histidine kinase [Signal transduction mechanisms]; Pfam:PF08448:PAS fold-4; ProSiteProfiles:PS50113:PAS-associated, C-terminal; SMART:SM00065:GAF domain; SUPERFAMILY:SSF55785:PAS domain; sensory_box.
   
  
 0.483
Your Current Organism:
Rubrobacter radiotolerans
NCBI taxonomy Id: 42256
Other names: ATCC 51242, Arthrobacter radiotolerans, CIP 106991, DSM 46359, DSM 5868, IAM 12072, IFO 14777, JCM 2153, NBRC 14777, R. radiotolerans, strain P-1
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.