STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHY45627.1Purine catabolism regulatory protein-like family; COG:COG2508: Regulator of polyketide synthase expression [Signal transduction mechanisms / Secondary metabolites biosynthesis transport and catabolism]; Pfam:PF07905:Purine catabolism PurC-like. (504 aa)    
Predicted Functional Partners:
AHY45631.1
TIGRFAM:TIGR01230:Agmatinase-related; COG:COG0010: Arginase/agmatinase/formimionoglutamate hydrolase arginase family [Amino acid transport and metabolism]; Pfam:PF00491:Ureohydrolase; PIRSF:PIRSF036979:Ureohydrolase; PRINTS:PR00116:Ureohydrolase; ProSitePatterns:PS01053:Ureohydrolase, manganese-binding site; ProSiteProfiles:PS51409:Ureohydrolase; SUPERFAMILY:SSF52768:No Description;KEGG: 00330; MetaCyc: PWY-6305; UniPathway: UPA00534; Belongs to the arginase family.
 
     0.664
AHY45628.1
COG:COG1457: Purine-cytosine permease and related proteins [Nucleotide transport and metabolism]; Pfam:PF02133:Permease, cytosine/purines, uracil, thiamine, allantoin; Pfam:PF02133:Permease, cytosine/purines, uracil, thiamine, allantoin; Belongs to the purine-cytosine permease (2.A.39) family.
 
     0.637
AHY45629.1
COG:COG1878: Predicted metal-dependent hydrolase [General function prediction only]; Pfam:PF04199:Putative cyclase; Pfam:PF04199:Putative cyclase; SUPERFAMILY:SSF102198:No Description.
       0.535
AHY45630.1
Pfam:PF13474:SnoaL-like domain; SUPERFAMILY:SSF54427:No Description.
       0.504
AHY46764.1
Hypothetical Protein; Ab initio prediction:Prodigal:2.60.
  
     0.493
AHY45633.1
GABAtrnsam: 4-aminobutyrate transaminase; TIGRFAM:TIGR00700:4-aminobutyrate aminotransferase, bacterial; COG:COG0160: 4-aminobutyrate aminotransferase and related aminotransferases [Amino acid transport and metabolism]; Pfam:PF00202:Aminotransferase class-III; PIRSF:PIRSF000521:No Description; ProSitePatterns:PS00600:Aminotransferase class-III; SUPERFAMILY:SSF53383:Pyridoxal phosphate-dependent transferase;KEGG: 00250; KEGG: 00280; KEGG: 00410; KEGG: 00640; KEGG: 00650; MetaCyc: PWY-4321; UniPathway: UPA00733; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
 
   
 0.484
AHY46239.1
MarR family; COG:COG1846: Transcriptional regulators [Transcription]; Pfam:PF12802:MarR family; PRINTS:PR00598:Transcription regulator HTH, MarR-type; ProSiteProfiles:PS50995:Transcription regulator HTH, MarR-type; SMART:SM00347:Transcription regulator HTH, MarR-type; SUPERFAMILY:SSF46785:No Description.
  
  
 0.431
Your Current Organism:
Rubrobacter radiotolerans
NCBI taxonomy Id: 42256
Other names: ATCC 51242, Arthrobacter radiotolerans, CIP 106991, DSM 46359, DSM 5868, IAM 12072, IFO 14777, JCM 2153, NBRC 14777, R. radiotolerans, strain P-1
Server load: low (26%) [HD]
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