STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHY45629.1COG:COG1878: Predicted metal-dependent hydrolase [General function prediction only]; Pfam:PF04199:Putative cyclase; Pfam:PF04199:Putative cyclase; SUPERFAMILY:SSF102198:No Description. (220 aa)    
Predicted Functional Partners:
AHY45630.1
Pfam:PF13474:SnoaL-like domain; SUPERFAMILY:SSF54427:No Description.
      0.954
AHY45628.1
COG:COG1457: Purine-cytosine permease and related proteins [Nucleotide transport and metabolism]; Pfam:PF02133:Permease, cytosine/purines, uracil, thiamine, allantoin; Pfam:PF02133:Permease, cytosine/purines, uracil, thiamine, allantoin; Belongs to the purine-cytosine permease (2.A.39) family.
       0.791
AHY45631.1
TIGRFAM:TIGR01230:Agmatinase-related; COG:COG0010: Arginase/agmatinase/formimionoglutamate hydrolase arginase family [Amino acid transport and metabolism]; Pfam:PF00491:Ureohydrolase; PIRSF:PIRSF036979:Ureohydrolase; PRINTS:PR00116:Ureohydrolase; ProSitePatterns:PS01053:Ureohydrolase, manganese-binding site; ProSiteProfiles:PS51409:Ureohydrolase; SUPERFAMILY:SSF52768:No Description;KEGG: 00330; MetaCyc: PWY-6305; UniPathway: UPA00534; Belongs to the arginase family.
       0.740
AHY47751.1
COG:COG3246: Uncharacterized conserved protein [Function unknown]; Pfam:PF05853:3-keto-5-aminohexanoate cleavage enzyme.
  
    0.712
AHY48028.1
Cupin domain; COG:COG1917: Uncharacterized conserved protein contains double-stranded beta-helix domain [Function unknown]; Pfam:PF07883:Cupin 2, conserved barrel; SUPERFAMILY:SSF51182:RmlC-like cupin domain.
 
    0.656
AHY45627.1
Purine catabolism regulatory protein-like family; COG:COG2508: Regulator of polyketide synthase expression [Signal transduction mechanisms / Secondary metabolites biosynthesis transport and catabolism]; Pfam:PF07905:Purine catabolism PurC-like.
       0.535
AHY45632.1
Hypothetical Protein; Ab initio prediction:Prodigal:2.60.
       0.511
AHY45426.1
Pfam:PF03936:Terpene synthase, metal-binding domain; SUPERFAMILY:SSF48576:Terpenoid synthase.
  
     0.464
AHY47172.1
COG:COG2814: Arabinose efflux permease [Carbohydrate transport and metabolism]; Pfam:PF07690:Major facilitator superfamily; Pfam:PF07690:Major facilitator superfamily; PRINTS:PR01035:Tetracycline resistance protein, TetA/multidrug resistance protein MdtG; ProSiteProfiles:PS50850:Major facilitator superfamily domain; SUPERFAMILY:SSF103473:Major facilitator superfamily domain, general substrate transporter.
   
    0.443
AHY47724.1
Drug resistance MFS transporter, drugH+ antiporter-2 (14 Spanner) (DHA2) family; TIGRFAM:TIGR00711:Drug resistance transporter EmrB/QacA subfamily; COG:COG2814: Arabinose efflux permease [Carbohydrate transport and metabolism]; Pfam:PF07690:Major facilitator superfamily; PRINTS:PR01036:Tetracycline resistance protein TetB/drug resistance transporter; ProSiteProfiles:PS50850:Major facilitator superfamily domain; SUPERFAMILY:SSF103473:Major facilitator superfamily domain, general substrate transporter; efflux_EmrB.
   
    0.443
Your Current Organism:
Rubrobacter radiotolerans
NCBI taxonomy Id: 42256
Other names: ATCC 51242, Arthrobacter radiotolerans, CIP 106991, DSM 46359, DSM 5868, IAM 12072, IFO 14777, JCM 2153, NBRC 14777, R. radiotolerans, strain P-1
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