STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHY45644.1Hypothetical Protein; Ab initio prediction:Prodigal:2.60. (163 aa)    
Predicted Functional Partners:
AHY47966.1
Pfam:PF13396:Cardiolipin synthase N-terminal.
  
     0.603
AHY47270.1
Pfam:PF01814:Haemerythrin/HHE cation-binding motif.
  
     0.577
AHY45643.1
Hypothetical Protein; Ab initio prediction:Prodigal:2.60.
       0.570
AHY45642.1
Hypothetical Protein; Ab initio prediction:Prodigal:2.60.
       0.568
AHY46977.1
Fusaric acid resistance protein-like; COG:COG4129: Predicted membrane protein [Function unknown]; Pfam:PF13515:Fusaric acid resistance protein-like.
  
     0.538
AHY47260.1
Fusaric acid resistance protein-like; COG:COG4129: Predicted membrane protein [Function unknown]; Pfam:PF13515:Fusaric acid resistance protein-like.
  
     0.506
AHY47135.1
Glyoxalase-like domain; COG:COG0346: Lactoylglutathione lyase and related lyases [Amino acid transport and metabolism]; Pfam:PF12681:Glyoxalase-like domain; SUPERFAMILY:SSF54593:No Description.
  
     0.464
AHY47572.1
Fusaric acid resistance protein-like; COG:COG4129: Predicted membrane protein [Function unknown]; Pfam:PF13515:Fusaric acid resistance protein-like.
  
     0.432
AHY45645.1
Hypothetical Protein; Ab initio prediction:Prodigal:2.60.
       0.422
Your Current Organism:
Rubrobacter radiotolerans
NCBI taxonomy Id: 42256
Other names: ATCC 51242, Arthrobacter radiotolerans, CIP 106991, DSM 46359, DSM 5868, IAM 12072, IFO 14777, JCM 2153, NBRC 14777, R. radiotolerans, strain P-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.