STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHY45734.1Hypothetical Protein; Ab initio prediction:Prodigal:2.60. (182 aa)    
Predicted Functional Partners:
AHY45735.1
Hypothetical Protein; Ab initio prediction:Prodigal:2.60.
       0.773
AHY45736.1
Hypothetical Protein; Ab initio prediction:Prodigal:2.60.
       0.773
AHY45737.1
COG:COG4770: Acetyl/propionyl-CoA carboxylase alpha subunit [Lipid metabolism]; Pfam:PF02786:Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain; Pfam:PF02786:Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain; ProSitePatterns:PS00866:Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain; ProSiteProfiles:PS50968:Biotin/lipoyl attachment; SMART:SM00878:Biotin carboxylase, C-terminal; SUPERFAMILY:SSF56059:No Description.
       0.773
AHY45733.1
Hypothetical Protein; Ab initio prediction:Prodigal:2.60.
      
0.701
AHY45738.1
Hypothetical Protein; Ab initio prediction:Prodigal:2.60.
       0.658
AHY45732.1
Hypothetical Protein; Ab initio prediction:Prodigal:2.60.
       0.637
AHY45731.1
COG:COG4799: Acetyl-CoA carboxylase carboxyltransferase component (subunits alpha and beta) [Lipid metabolism]; Pfam:PF01039:Carboxyl transferase; Pfam:PF01039:Carboxyl transferase; PRINTS:PR01070:Acetyl-CoA carboxylase carboxyl transferase, beta subunit; ProSiteProfiles:PS50980:Acetyl-coenzyme A carboxyltransferase, N-terminal; SUPERFAMILY:SSF52096:No Description.
       0.549
AHY45739.1
Hypothetical Protein; Ab initio prediction:Prodigal:2.60.
       0.516
AHY45740.1
Hypothetical Protein; Ab initio prediction:Prodigal:2.60.
       0.478
AHY45730.1
Patatin-like phospholipase; COG:COG1752: Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]; Pfam:PF01734:Patatin/Phospholipase A2-related; SUPERFAMILY:SSF52151:Acyl transferase/acyl hydrolase/lysophospholipase.
       0.423
Your Current Organism:
Rubrobacter radiotolerans
NCBI taxonomy Id: 42256
Other names: ATCC 51242, Arthrobacter radiotolerans, CIP 106991, DSM 46359, DSM 5868, IAM 12072, IFO 14777, JCM 2153, NBRC 14777, R. radiotolerans, strain P-1
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