STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHY45791.1COG:COG1937: Uncharacterized protein conserved in bacteria [Function unknown]; Pfam:PF02583:Metal-sensitive transcriptional repressor; Pfam:PF02583:Metal-sensitive transcriptional repressor. (86 aa)    
Predicted Functional Partners:
murE
murE: UDP-N-acetylmuramyl-tripeptide synthetase; Catalyzes the addition of an amino acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan.
  
   0.801
AHY45792.1
Hypothetical Protein; Ab initio prediction:Prodigal:2.60.
       0.773
AHY46980.1
Heavy metal translocating P-type ATPase; TIGRFAM:TIGR01525:Cation-transporting P-type ATPase, subfamily IB; COG:COG2217: Cation transport ATPase [Inorganic ion transport and metabolism]; Pfam:PF00122:P-type ATPase, A domain; PRINTS:PR00119:Cation-transporting P-type ATPase; ProSitePatterns:PS01047:Heavy-metal-associated, conserved site; ProSiteProfiles:PS50846:Heavy metal-associated domain, HMA; SUPERFAMILY:SSF56784:HAD-like domain; ATPase-IB_hvy.
  
  
 0.686
pyrE
pyrE: orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP).
       0.604
AHY45793.1
Hypothetical Protein; Ab initio prediction:Prodigal:2.60.
       0.596
AHY47266.1
S-formylglutathione hydrolase; Serine hydrolase involved in the detoxification of formaldehyde.
  
  
 0.531
AHY45716.1
NDMA-dependent alcohol dehydrogenase, Rxyl_3153 family; TIGRFAM:TIGR03989:Alcohol dehydrogenase, zinc-type, actinomycetes; COG:COG1062: Zn-dependent alcohol dehydrogenases class III [Energy production and conversion]; Pfam:PF08240:Alcohol dehydrogenase GroES-like; ProSitePatterns:PS00059:Alcohol dehydrogenase, zinc-type, conserved site; SMART:SM00829:Polyketide synthase, enoylreductase; SUPERFAMILY:SSF50129:GroES-like.
  
  
 0.515
AHY47265.1
TIGRFAM:TIGR02818:Alcohol dehydrogenase class III/S-(hydroxymethyl)glutathione dehydrogenase; COG:COG1062: Zn-dependent alcohol dehydrogenases class III [Energy production and conversion]; Pfam:PF08240:Alcohol dehydrogenase GroES-like; ProSitePatterns:PS00059:Alcohol dehydrogenase, zinc-type, conserved site; SMART:SM00829:Polyketide synthase, enoylreductase; SUPERFAMILY:SSF50129:GroES-like;KEGG: 00010; KEGG: 00051; KEGG: 00053; KEGG: 00071; KEGG: 00140; KEGG: 00253; KEGG: 00260; KEGG: 00350; KEGG: 00362; KEGG: 00363; KEGG: 00520; KEGG: 00523; KEGG: 00524; KEGG: 00591; KEGG: 00622; KEGG [...]
  
  
 0.515
AHY45795.1
Bacterial nucleoid DNA-binding protein; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions.
       0.422
Your Current Organism:
Rubrobacter radiotolerans
NCBI taxonomy Id: 42256
Other names: ATCC 51242, Arthrobacter radiotolerans, CIP 106991, DSM 46359, DSM 5868, IAM 12072, IFO 14777, JCM 2153, NBRC 14777, R. radiotolerans, strain P-1
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