STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHY45832.1Oxidoreductase molybdopterin binding domain; COG:COG2041: Sulfite oxidase and related enzymes [General function prediction only]; Pfam:PF00174:Oxidoreductase, molybdopterin-binding domain; PRINTS:PR00407:Eukaryotic molybdopterin oxidoreductase; SUPERFAMILY:SSF56524:Oxidoreductase, molybdopterin-binding domain. (567 aa)    
Predicted Functional Partners:
AHY46589.1
TIGRFAM:TIGR02962:Hydroxyisourate hydrolase; COG:COG2351: Transthyretin-like protein [General function prediction only]; Pfam:PF00576:Transthyretin/hydroxyisourate hydrolase, superfamily; PRINTS:PR00189:Transthyretin/hydroxyisourate hydrolase; ProSitePatterns:PS00768:Transthyretin, thyroxine binding site; SUPERFAMILY:SSF49472:Transthyretin/hydroxyisourate hydrolase, superfamily;KEGG: 00230; MetaCyc: PWY-5691; hdxy_isourate; Belongs to the transthyretin family. 5-hydroxyisourate hydrolase subfamily.
   
   0.460
AHY46895.1
Anti-sigma-K factor rskA; COG:COG5343: Uncharacterized protein conserved in bacteria [Function unknown]; Pfam:PF10099:Anti-sigma K factor RskA.
 
     0.457
AHY46616.1
COG:COG2258: Uncharacterized protein conserved in bacteria [Function unknown]; Pfam:PF03473:Molybdenum cofactor sulfurase, C-terminal; Pfam:PF03473:Molybdenum cofactor sulfurase, C-terminal; ProSiteProfiles:PS51340:Molybdenum cofactor sulfurase, C-terminal; SUPERFAMILY:SSF50800:Pyruvate kinase-like, insert domain.
 
   
 0.439
AHY46122.1
Hypothetical Protein; Ab initio prediction:Prodigal:2.60.
 
    0.436
nfi
Deoxyinosine 3'endonuclease (endonuclease V); DNA repair enzyme involved in the repair of deaminated bases. Selectively cleaves double-stranded DNA at the second phosphodiester bond 3' to a deoxyinosine leaving behind the intact lesion on the nicked DNA.
       0.423
AHY47135.1
Glyoxalase-like domain; COG:COG0346: Lactoylglutathione lyase and related lyases [Amino acid transport and metabolism]; Pfam:PF12681:Glyoxalase-like domain; SUPERFAMILY:SSF54593:No Description.
  
   
 0.413
Your Current Organism:
Rubrobacter radiotolerans
NCBI taxonomy Id: 42256
Other names: ATCC 51242, Arthrobacter radiotolerans, CIP 106991, DSM 46359, DSM 5868, IAM 12072, IFO 14777, JCM 2153, NBRC 14777, R. radiotolerans, strain P-1
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