STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHY45844.1MOSC domain; COG:COG2258: Uncharacterized protein conserved in bacteria [Function unknown]; Pfam:PF03473:Molybdenum cofactor sulfurase, C-terminal; ProSiteProfiles:PS51340:Molybdenum cofactor sulfurase, C-terminal; SUPERFAMILY:SSF50800:Pyruvate kinase-like, insert domain. (178 aa)    
Predicted Functional Partners:
AHY45845.1
COG:COG3881: Uncharacterized protein conserved in bacteria [Function unknown]; Pfam:PF05239:PRC-barrel domain; Pfam:PF05239:PRC-barrel domain; SUPERFAMILY:SSF50346:PRC-barrel-like.
  
    0.544
AHY47414.1
Flavin containing amine oxidoreductase; COG:COG1233: Phytoene dehydrogenase and related proteins [Secondary metabolites biosynthesis transport and catabolism]; Pfam:PF01593:Amine oxidase; SUPERFAMILY:SSF51905:No Description.
  
     0.427
Your Current Organism:
Rubrobacter radiotolerans
NCBI taxonomy Id: 42256
Other names: ATCC 51242, Arthrobacter radiotolerans, CIP 106991, DSM 46359, DSM 5868, IAM 12072, IFO 14777, JCM 2153, NBRC 14777, R. radiotolerans, strain P-1
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