STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHY45873.1COG:COG1063: Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only]; Pfam:PF00107:Alcohol dehydrogenase, C-terminal; Pfam:PF00107:Alcohol dehydrogenase, C-terminal; ProSitePatterns:PS00059:Alcohol dehydrogenase, zinc-type, conserved site; SMART:SM00829:Polyketide synthase, enoylreductase; SUPERFAMILY:SSF50129:GroES-like. (354 aa)    
Predicted Functional Partners:
AHY45871.1
TIGRFAM:TIGR02415:Acetoin reductase; COG:COG1028: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis transport and catabolism / General function prediction only]; Pfam:PF00106:Short-chain dehydrogenase/reductase SDR; PRINTS:PR00081:Glucose/ribitol dehydrogenase; ProSitePatterns:PS00061:Short-chain dehydrogenase/reductase, conserved site; SUPERFAMILY:SSF51735:No Description;KEGG: 00650; MetaCyc: PWY-6389.
 
  0.952
AHY45872.1
Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; COG:COG0346: Lactoylglutathione lyase and related lyases [Amino acid transport and metabolism]; Pfam:PF13669:Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; SUPERFAMILY:SSF54593:No Description.
  
    0.734
AHY47404.1
COG:COG1063: Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only]; Pfam:PF00107:Alcohol dehydrogenase, C-terminal; Pfam:PF00107:Alcohol dehydrogenase, C-terminal; SMART:SM00829:Polyketide synthase, enoylreductase; SUPERFAMILY:SSF51735:No Description.
  
     0.630
AHY45874.1
Hypothetical Protein; Ab initio prediction:Prodigal:2.60.
       0.576
Your Current Organism:
Rubrobacter radiotolerans
NCBI taxonomy Id: 42256
Other names: ATCC 51242, Arthrobacter radiotolerans, CIP 106991, DSM 46359, DSM 5868, IAM 12072, IFO 14777, JCM 2153, NBRC 14777, R. radiotolerans, strain P-1
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