STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHY45890.1COG:COG0179: 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-17-dioic acid hydratase (catechol pathway) [Secondary metabolites biosynthesis transport and catabolism]; Pfam:PF01557:Fumarylacetoacetase, C-terminal; Pfam:PF01557:Fumarylacetoacetase, C-terminal; SUPERFAMILY:SSF56529:Fumarylacetoacetase, C-terminal-related. (273 aa)    
Predicted Functional Partners:
AHY45891.1
TIGRFAM:TIGR00229:PAS domain; COG:COG0642: Signal transduction histidine kinase [Signal transduction mechanisms]; Pfam:PF02518:Histidine kinase-like ATPase, ATP-binding domain; PRINTS:PR00344:Signal transduction histidine kinase-related protein, C-terminal; ProSiteProfiles:PS50112:PAS domain; SMART:SM00387:Histidine kinase-like ATPase, ATP-binding domain; SUPERFAMILY:SSF55874:Histidine kinase-like ATPase, ATP-binding domain; sensory_box.
     
 0.614
AHY45889.1
Acetyltransferase (GNAT) domain; COG:COG1670: Acetyltransferases including N-acetylases of ribosomal proteins [Translation ribosomal structure and biogenesis]; Pfam:PF13302:GNAT domain; ProSiteProfiles:PS51186:GNAT domain; SUPERFAMILY:SSF55729:Acyl-CoA N-acyltransferase.
  
    0.483
AHY46506.1
COG:COG0077: Prephenate dehydratase [Amino acid transport and metabolism]; Pfam:PF00800:Prephenate dehydratase; Pfam:PF00800:Prephenate dehydratase; PIRSF:PIRSF001500:Bifunctional P-protein, chorismate mutase/prephenate dehydratase; ProSiteProfiles:PS51168:Chorismate mutase; SMART:SM00830:Chorismate mutase; SUPERFAMILY:SSF53850:No Description.
     
 0.449
AHY46293.1
Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; COG:COG0346: Lactoylglutathione lyase and related lyases [Amino acid transport and metabolism]; Pfam:PF00903:Glyoxalase/fosfomycin resistance/dioxygenase domain; SUPERFAMILY:SSF54593:No Description.
  
  
 0.431
AHY46347.1
TIGRFAM:TIGR02425:4-carboxymuconolactone decarboxylase; COG:COG0599: Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit [Function unknown]; Pfam:PF02627:Carboxymuconolactone decarboxylase; SUPERFAMILY:SSF69118:No Description;KEGG: 00362; UniPathway: UPA00157; decarb_PcaC.
  
 
 0.430
AHY46900.1
TIGRFAM:TIGR01798:Citrate synthase, type II; COG:COG0372: Citrate synthase [Energy production and conversion]; Pfam:PF00285:Citrate synthase-like; PIRSF:PIRSF001369:Citrate synthase, bacterial-type; PRINTS:PR00143:Citrate synthase-like; ProSitePatterns:PS00480:Citrate synthase active site; SUPERFAMILY:SSF48256:Citrate synthase-like, core;KEGG: 00020; KEGG: 00630; MetaCyc: PWY-5750; UniPathway: UPA00223; cit_synth_I; Belongs to the citrate synthase family.
   
  
 0.422
Your Current Organism:
Rubrobacter radiotolerans
NCBI taxonomy Id: 42256
Other names: ATCC 51242, Arthrobacter radiotolerans, CIP 106991, DSM 46359, DSM 5868, IAM 12072, IFO 14777, JCM 2153, NBRC 14777, R. radiotolerans, strain P-1
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