STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHY45893.1COG:COG4221: Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]; Pfam:PF00106:Short-chain dehydrogenase/reductase SDR; Pfam:PF00106:Short-chain dehydrogenase/reductase SDR; PIRSF:PIRSF000126:Short-chain dehydrogenase/reductase SDR; PRINTS:PR00081:Glucose/ribitol dehydrogenase; ProSitePatterns:PS00061:Short-chain dehydrogenase/reductase, conserved site; SMART:SM00822:Polyketide synthase/Fatty acid synthase, KR; SUPERFAMILY:SSF51735:No Description; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (257 aa)    
Predicted Functional Partners:
AHY45894.1
TIGRFAM:TIGR01746:Thioester reductase domain; COG:COG3320: Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis transport and catabolism]; Pfam:PF00501:AMP-dependent synthetase/ligase; ProSitePatterns:PS00012:Phosphopantetheine attachment site; ProSiteProfiles:PS50075:Acyl carrier protein-like; SMART:SM00823:Polyketide synthase, phosphopantetheine-binding domain; SUPERFAMILY:SSF56801:No Description.
 
 0.994
AHY45455.1
Pfam:PF13469:Sulfotransferase family; SUPERFAMILY:SSF52540:P-loop containing nucleoside triphosphate hydrolase.
  
    0.571
AHY47480.1
E3 binding domain; COG:COG0508: Pyruvate/2-oxoglutarate dehydrogenase complex dihydrolipoamide acyltransferase (E2) component and related enzymes [Energy production and conversion]; Pfam:PF02817:E3 binding; SUPERFAMILY:SSF47005:E3 binding.
  
   0.566
AHY47369.1
Sulfatase; COG:COG3119: Arylsulfatase A and related enzymes [Inorganic ion transport and metabolism]; Pfam:PF00884:Sulfatase; SUPERFAMILY:SSF53649:Alkaline-phosphatase-like, core domain.
  
   0.509
AHY45473.1
Cyclic nucleotide-binding domain; COG:COG0664: cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases [Signal transduction mechanisms]; Pfam:PF00027:Cyclic nucleotide-binding domain; ProSiteProfiles:PS50042:Cyclic nucleotide-binding domain; SMART:SM00100:Cyclic nucleotide-binding domain; SUPERFAMILY:SSF51206:Cyclic nucleotide-binding-like.
  
  0.473
AHY45911.1
FAD dependent oxidoreductase; COG:COG0404: Glycine cleavage system T protein (aminomethyltransferase) [Amino acid transport and metabolism]; Pfam:PF01266:FAD dependent oxidoreductase; SUPERFAMILY:SSF103025:No Description; Belongs to the GcvT family.
  
 0.438
AHY47725.1
COG:COG1028: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis transport and catabolism / General function prediction only]; Pfam:PF00106:Short-chain dehydrogenase/reductase SDR; Pfam:PF00106:Short-chain dehydrogenase/reductase SDR; PRINTS:PR00081:Glucose/ribitol dehydrogenase; ProSitePatterns:PS00061:Short-chain dehydrogenase/reductase, conserved site; SUPERFAMILY:SSF51735:No Description; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
    
0.436
AHY47486.1
Hypothetical Protein; Ab initio prediction:Prodigal:2.60.
  
   0.431
AHY46924.1
COG:COG4578: Glucitol operon activator [Transcription]; Pfam:PF06923:Glucitol operon activator.
  
    0.426
AHY46925.1
EII-GUT: PTS system, glucitol/sorbitol-specific, IIC component; TIGRFAM:TIGR00821:Phosphotransferase system, enzyme II sorbitol-specific factor; COG:COG3730: Phosphotransferase system sorbitol-specific component IIC [Carbohydrate transport and metabolism]; Pfam:PF03608:Phosphotransferase system, enzyme II sorbitol-specific factor; PIRSF:PIRSF038321:Phosphotransferase system, enzyme II sorbitol-specific factor; ProSiteProfiles:PS51107:Phosphotransferase system, enzyme II sorbitol-specific factor.
  
    0.423
Your Current Organism:
Rubrobacter radiotolerans
NCBI taxonomy Id: 42256
Other names: ATCC 51242, Arthrobacter radiotolerans, CIP 106991, DSM 46359, DSM 5868, IAM 12072, IFO 14777, JCM 2153, NBRC 14777, R. radiotolerans, strain P-1
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