STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHY45901.1acetoacetate-CoA ligase; TIGRFAM:TIGR01217:Acetoacetyl-CoA synthase; COG:COG0365: Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases [Lipid metabolism]; Pfam:PF00501:AMP-dependent synthetase/ligase; ProSitePatterns:PS00455:AMP-binding, conserved site; SUPERFAMILY:SSF56801:No Description;KEGG: 00650; ac_ac_CoA_syn. (669 aa)    
Predicted Functional Partners:
AHY45900.1
TIGRFAM:TIGR01963:3-hydroxybutyrate dehydrogenase; COG:COG1028: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis transport and catabolism / General function prediction only]; Pfam:PF00106:Short-chain dehydrogenase/reductase SDR; PRINTS:PR00081:Glucose/ribitol dehydrogenase; SUPERFAMILY:SSF51735:No Description; PHB_DH.
  
  0.963
AHY47122.1
3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; COG:COG1250: 3-hydroxyacyl-CoA dehydrogenase [Lipid metabolism]; Pfam:PF02737:3-hydroxyacyl-CoA dehydrogenase, NAD binding; SUPERFAMILY:SSF51735:No Description;MetaCyc: PWY-1361; MetaCyc: PWY-5109; MetaCyc: PWY-5136; MetaCyc: PWY-5138; MetaCyc: PWY-5789; MetaCyc: PWY-6435; MetaCyc: PWY-735; UniPathway: UPA00659.
 
 0.961
AHY46904.1
HMGL-like; COG:COG0119: Isopropylmalate/homocitrate/citramalate synthases [Amino acid transport and metabolism]; Pfam:PF00682:Pyruvate carboxyltransferase; ProSiteProfiles:PS50991:Pyruvate carboxyltransferase; SUPERFAMILY:SSF51569:No Description.
 
 0.942
AHY47839.1
COG:COG1250: 3-hydroxyacyl-CoA dehydrogenase [Lipid metabolism]; Pfam:PF02737:3-hydroxyacyl-CoA dehydrogenase, NAD binding; Pfam:PF02737:3-hydroxyacyl-CoA dehydrogenase, NAD binding; PIRSF:PIRSF000105:3-hydroxyacyl-CoA dehydrogenase; SUPERFAMILY:SSF51735:No Description.
  
 
 0.927
AHY45707.1
AcCoA-C-Actrans: acetyl-CoA C-acetyltransferase; TIGRFAM:TIGR01930:Thiolase; COG:COG0183: Acetyl-CoA acetyltransferase [Lipid metabolism]; Pfam:PF00108:Thiolase, N-terminal; PIRSF:PIRSF000429:Thiolase; ProSitePatterns:PS00099:Thiolase, active site; SUPERFAMILY:SSF53901:Thiolase-like; Belongs to the thiolase-like superfamily. Thiolase family.
  
 
 0.926
AHY45887.1
AcCoA-C-Actrans: acetyl-CoA C-acetyltransferase; TIGRFAM:TIGR01930:Thiolase; COG:COG0183: Acetyl-CoA acetyltransferase [Lipid metabolism]; Pfam:PF00108:Thiolase, N-terminal; PIRSF:PIRSF000429:Thiolase; ProSitePatterns:PS00099:Thiolase, active site; SUPERFAMILY:SSF53901:Thiolase-like; Belongs to the thiolase-like superfamily. Thiolase family.
  
 
 0.926
AHY46997.1
TIGRFAM:TIGR02429:3-oxoacid CoA-transferase, subunit A; COG:COG1788: Acyl CoA:acetate/3-ketoacid CoA transferase alpha subunit [Lipid metabolism]; Pfam:PF01144:Coenzyme A transferase family I; SMART:SM00882:Coenzyme A transferase family I; SUPERFAMILY:SSF100950:No Description; pcaI_scoA_fam.
  
 
 0.907
AHY45883.1
COG:COG1028: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis transport and catabolism / General function prediction only]; Pfam:PF00106:Short-chain dehydrogenase/reductase SDR; Pfam:PF00106:Short-chain dehydrogenase/reductase SDR; PRINTS:PR00081:Glucose/ribitol dehydrogenase; ProSitePatterns:PS00061:Short-chain dehydrogenase/reductase, conserved site; SMART:SM00822:Polyketide synthase/Fatty acid synthase, KR; SUPERFAMILY:SSF51735:No Description.
  
  0.901
AHY46900.1
TIGRFAM:TIGR01798:Citrate synthase, type II; COG:COG0372: Citrate synthase [Energy production and conversion]; Pfam:PF00285:Citrate synthase-like; PIRSF:PIRSF001369:Citrate synthase, bacterial-type; PRINTS:PR00143:Citrate synthase-like; ProSitePatterns:PS00480:Citrate synthase active site; SUPERFAMILY:SSF48256:Citrate synthase-like, core;KEGG: 00020; KEGG: 00630; MetaCyc: PWY-5750; UniPathway: UPA00223; cit_synth_I; Belongs to the citrate synthase family.
  
 
 0.563
AHY47866.1
Sss: transporter, solute:sodium symporter (SSS) family; TIGRFAM:TIGR00813:Sodium/solute symporter, subgroup; COG:COG4147: Predicted symporter [General function prediction only]; Pfam:PF00474:Sodium/solute symporter; ProSitePatterns:PS00457:Sodium/solute symporter, conserved site; ProSiteProfiles:PS50283:Sodium/solute symporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
  
  
 0.491
Your Current Organism:
Rubrobacter radiotolerans
NCBI taxonomy Id: 42256
Other names: ATCC 51242, Arthrobacter radiotolerans, CIP 106991, DSM 46359, DSM 5868, IAM 12072, IFO 14777, JCM 2153, NBRC 14777, R. radiotolerans, strain P-1
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