STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHY45920.1COG:COG3119: Arylsulfatase A and related enzymes [Inorganic ion transport and metabolism]; Pfam:PF00884:Sulfatase; Pfam:PF00884:Sulfatase; SUPERFAMILY:SSF53649:Alkaline-phosphatase-like, core domain. (496 aa)    
Predicted Functional Partners:
AHY45918.1
COG:COG1012: NAD-dependent aldehyde dehydrogenases [Energy production and conversion]; Pfam:PF00171:Aldehyde dehydrogenase domain; Pfam:PF00171:Aldehyde dehydrogenase domain; SUPERFAMILY:SSF53720:Aldehyde/histidinol dehydrogenase.
  
  
 0.783
AHY45919.1
COG:COG1454: Alcohol dehydrogenase class IV [Energy production and conversion]; Pfam:PF00465:Alcohol dehydrogenase, iron-type; Pfam:PF00465:Alcohol dehydrogenase, iron-type; ProSitePatterns:PS00913:Alcohol dehydrogenase, iron-type, conserved site; SUPERFAMILY:SSF56796:No Description.
  
    0.775
AHY45921.1
EAL domain; COG:COG2200: FOG: EAL domain [Signal transduction mechanisms]; Pfam:PF00563:Diguanylate phosphodiesterase, EAL domain; ProSiteProfiles:PS50883:Diguanylate phosphodiesterase, EAL domain; SMART:SM00052:Diguanylate phosphodiesterase, EAL domain; SUPERFAMILY:SSF141868:Diguanylate phosphodiesterase, EAL domain.
       0.671
AHY45924.1
COG:COG1028: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis transport and catabolism / General function prediction only]; Pfam:PF00106:Short-chain dehydrogenase/reductase SDR; Pfam:PF00106:Short-chain dehydrogenase/reductase SDR; PRINTS:PR00081:Glucose/ribitol dehydrogenase; ProSitePatterns:PS00061:Short-chain dehydrogenase/reductase, conserved site; SMART:SM00822:Polyketide synthase/Fatty acid synthase, KR; SUPERFAMILY:SSF51735:No Description.
  
   0.577
AHY47460.1
TIGRFAM:TIGR03440:Ergothioneine biosynthesis protein EgtB; COG:COG1262: Uncharacterized conserved protein [Function unknown]; Pfam:PF03781:Formylglycine-generating sulphatase enzyme domain; SUPERFAMILY:SSF56436:C-type lectin fold; egtB_TIGR03440.
 
   0.566
AHY46088.1
COG:COG1028: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis transport and catabolism / General function prediction only]; Pfam:PF00106:Short-chain dehydrogenase/reductase SDR; Pfam:PF00106:Short-chain dehydrogenase/reductase SDR; PRINTS:PR00081:Glucose/ribitol dehydrogenase; ProSitePatterns:PS00061:Short-chain dehydrogenase/reductase, conserved site; SMART:SM00822:Polyketide synthase/Fatty acid synthase, KR; SUPERFAMILY:SSF51735:No Description; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
   0.458
AHY45922.1
Hypothetical protein; TIGRFAM:TIGR00369:Phenylacetic acid degradation-related domain; COG:COG2050: Uncharacterized protein possibly involved in aromatic compounds catabolism [Secondary metabolites biosynthesis transport and catabolism]; Pfam:PF03061:Thioesterase superfamily; SUPERFAMILY:SSF54637:No Description; unchar_dom_1.
       0.456
AHY47128.1
Putative dehydrogenase-related protein; COG:COG0673: Predicted dehydrogenases and related proteins [General function prediction only]; Pfam:PF01408:Oxidoreductase, N-terminal; Pfam:PF01408:Oxidoreductase, N-terminal; SUPERFAMILY:SSF51735:No Description.
 
    0.404
Your Current Organism:
Rubrobacter radiotolerans
NCBI taxonomy Id: 42256
Other names: ATCC 51242, Arthrobacter radiotolerans, CIP 106991, DSM 46359, DSM 5868, IAM 12072, IFO 14777, JCM 2153, NBRC 14777, R. radiotolerans, strain P-1
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