STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHY46036.1COG:COG0438: Glycosyltransferase [Cell envelope biogenesis outer membrane]; Pfam:PF00534:Glycosyl transferase, family 1; Pfam:PF00534:Glycosyl transferase, family 1; SUPERFAMILY:SSF53756:No Description. (405 aa)    
Predicted Functional Partners:
AHY46037.1
COG:COG0463: Glycosyltransferases involved in cell wall biogenesis [Cell envelope biogenesis outer membrane]; Pfam:PF00535:Glycosyl transferase, family 2; ProSiteProfiles:PS50006:Forkhead-associated (FHA) domain; SUPERFAMILY:SSF53448:No Description.
 
 
 0.879
AHY46035.1
Uncharacterized protein family (UPF0104); COG:COG0392: Predicted integral membrane protein [Function unknown]; Pfam:PF03706:Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD.
 
    0.815
AHY47010.1
COG:COG0438: Glycosyltransferase [Cell envelope biogenesis outer membrane]; Pfam:PF13579:Glycosyl transferase 4-like domain; Pfam:PF13579:Glycosyl transferase 4-like domain; SUPERFAMILY:SSF53756:No Description.
  
     0.643
AHY47007.1
Glycosyl transferases group 1; COG:COG0438: Glycosyltransferase [Cell envelope biogenesis outer membrane]; Pfam:PF00534:Glycosyl transferase, family 1; SUPERFAMILY:SSF53756:No Description.
  
     0.629
AHY45743.1
TIGRFAM:TIGR03026:Nucleotide sugar dehydrogenase; COG:COG1004: Predicted UDP-glucose 6-dehydrogenase [Cell envelope biogenesis outer membrane]; Pfam:PF03721:UDP-glucose/GDP-mannose dehydrogenase, N-terminal; PIRSF:PIRSF000124:Nucleotide sugar dehydrogenase; SMART:SM00984:UDP-glucose/GDP-mannose dehydrogenase, C-terminal; SUPERFAMILY:SSF51735:No Description.
 
  
 0.628
AHY46038.1
COG:COG2206: HD-GYP domain [Signal transduction mechanisms]; Pfam:PF13487:HD domain; SUPERFAMILY:SSF109604:No Description.
 
     0.599
AHY46039.1
Hypothetical Protein; Ab initio prediction:Prodigal:2.60.
       0.530
glgB
1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
   
 0.526
AHY45742.1
TIGRFAM:TIGR03025:Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; COG:COG2148: Sugar transferases involved in lipopolysaccharide synthesis [Cell envelope biogenesis outer membrane]; Pfam:PF02397:Bacterial sugar transferase; EPS_sugtrans.
 
  
 0.526
AHY45478.1
TIGRFAM:TIGR02402:Malto-oligosyltrehalose trehalohydrolase; COG:COG0296: 14-alpha-glucan branching enzyme [Carbohydrate transport and metabolism]; Pfam:PF00128:Glycosyl hydrolase, family 13, catalytic domain; PIRSF:PIRSF006337:Malto-oligosyltrehalose trehalohydrolase; SMART:SM00642:Glycosyl hydrolase, family 13, subfamily, catalytic domain; SUPERFAMILY:SSF51445:Glycoside hydrolase, superfamily;MetaCyc: PWY-2661; UniPathway: UPA00299; trehalose_TreZ.
   
 0.512
Your Current Organism:
Rubrobacter radiotolerans
NCBI taxonomy Id: 42256
Other names: ATCC 51242, Arthrobacter radiotolerans, CIP 106991, DSM 46359, DSM 5868, IAM 12072, IFO 14777, JCM 2153, NBRC 14777, R. radiotolerans, strain P-1
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