STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHY46166.1Hypothetical Protein; Ab initio prediction:Prodigal:2.60; SUPERFAMILY:SSF48452:No Description. (144 aa)    
Predicted Functional Partners:
AHY46167.1
7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase, CofH subunit; TIGRFAM:TIGR03551:CofH family; COG:COG1060: Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes [Coenzyme metabolism / General function prediction only]; Pfam:PF04055:Radical SAM; Hamap:MF_01612:CofH family; SMART:SM00729:Elongator protein 3/MiaB/NifB; SUPERFAMILY:SSF102114:No Description;KEGG: 00130; KEGG: 00270; KEGG: 00380; KEGG: 00740; KEGG: 00860; KEGG: 00900; KEGG: 00906; UniPathway: UPA00072.
       0.773
AHY46168.1
COG:COG2897: Rhodanese-related sulfurtransferase [Inorganic ion transport and metabolism]; Pfam:PF00581:Rhodanese-like domain; Pfam:PF00581:Rhodanese-like domain; ProSitePatterns:PS00683:Thiosulphate sulfurtransferase, conserved site; ProSiteProfiles:PS50206:Rhodanese-like domain; SMART:SM00450:Rhodanese-like domain; SUPERFAMILY:SSF52821:Rhodanese-like domain.
       0.528
AHY46169.1
COG:COG0822: NifU homolog involved in Fe-S cluster formation [Energy production and conversion]; Pfam:PF01592:NIF system FeS cluster assembly, NifU, N-terminal; Pfam:PF01592:NIF system FeS cluster assembly, NifU, N-terminal; SUPERFAMILY:SSF82649:No Description.
       0.518
Your Current Organism:
Rubrobacter radiotolerans
NCBI taxonomy Id: 42256
Other names: ATCC 51242, Arthrobacter radiotolerans, CIP 106991, DSM 46359, DSM 5868, IAM 12072, IFO 14777, JCM 2153, NBRC 14777, R. radiotolerans, strain P-1
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