STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHY46213.1Transposase DDE domain; COG:COG3293: Transposase and inactivated derivatives [DNA replication recombination and repair]; Pfam:PF13586:Transposase DDE domain. (262 aa)    
Predicted Functional Partners:
AHY46214.1
Putative transposase of IS4/5 family (DUF4096); COG:COG3293: Transposase and inactivated derivatives [DNA replication recombination and repair]; Pfam:PF13340:Putative transposase IS4/IS5 family.
    0.994
AHY45596.1
Putative transposase of IS4/5 family (DUF4096); COG:COG3293: Transposase and inactivated derivatives [DNA replication recombination and repair]; Pfam:PF13340:Putative transposase IS4/IS5 family.
    0.978
AHY47306.1
Putative transposase of IS4/5 family (DUF4096); COG:COG3293: Transposase and inactivated derivatives [DNA replication recombination and repair]; Pfam:PF13340:Putative transposase IS4/IS5 family.
    0.978
AHY47382.1
Putative transposase of IS4/5 family (DUF4096); COG:COG3293: Transposase and inactivated derivatives [DNA replication recombination and repair]; Pfam:PF13340:Putative transposase IS4/IS5 family.
    0.978
AHY46296.1
Putative transposase of IS4/5 family (DUF4096); COG:COG3293: Transposase and inactivated derivatives [DNA replication recombination and repair]; Pfam:PF13340:Putative transposase IS4/IS5 family.
 
     0.808
AHY46215.1
COG:COG1304: L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases [Energy production and conversion]; Pfam:PF01070:FMN-dependent dehydrogenase; Pfam:PF01070:FMN-dependent dehydrogenase; PIRSF:PIRSF000138:Alpha-hydroxy acid dehydrogenase, FMN-dependent; ProSitePatterns:PS00557:FMN-dependent alpha-hydroxy acid dehydrogenase, active site; ProSiteProfiles:PS51349:Alpha-hydroxy acid dehydrogenase, FMN-dependent; SUPERFAMILY:SSF51395:No Description.
       0.541
AHY46212.1
COG:COG1216: Predicted glycosyltransferases [General function prediction only]; Pfam:PF13641:Glycosyltransferase like family 2; SUPERFAMILY:SSF53448:No Description.
       0.535
Your Current Organism:
Rubrobacter radiotolerans
NCBI taxonomy Id: 42256
Other names: ATCC 51242, Arthrobacter radiotolerans, CIP 106991, DSM 46359, DSM 5868, IAM 12072, IFO 14777, JCM 2153, NBRC 14777, R. radiotolerans, strain P-1
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.