STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHY46218.1COG:COG1028: Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis transport and catabolism / General function prediction only]; Pfam:PF00106:Short-chain dehydrogenase/reductase SDR; Pfam:PF00106:Short-chain dehydrogenase/reductase SDR; PRINTS:PR00081:Glucose/ribitol dehydrogenase; ProSitePatterns:PS00061:Short-chain dehydrogenase/reductase, conserved site; SUPERFAMILY:SSF51735:No Description. (311 aa)    
Predicted Functional Partners:
AHY46219.1
Hypothetical Protein; Ab initio prediction:Prodigal:2.60.
 
     0.618
AHY46217.1
COG:COG1215: Glycosyltransferases probably involved in cell wall biogenesis [Cell envelope biogenesis outer membrane]; Pfam:PF00535:Glycosyl transferase, family 2; SUPERFAMILY:SSF53448:No Description.
   
   0.581
AHY46216.1
Glycosyl transferases group 1; COG:COG0438: Glycosyltransferase [Cell envelope biogenesis outer membrane]; Pfam:PF13692:Glycosyl transferases group 1; SUPERFAMILY:SSF53756:No Description.
  
   0.559
AHY46924.1
COG:COG4578: Glucitol operon activator [Transcription]; Pfam:PF06923:Glucitol operon activator.
  
    0.426
AHY46925.1
EII-GUT: PTS system, glucitol/sorbitol-specific, IIC component; TIGRFAM:TIGR00821:Phosphotransferase system, enzyme II sorbitol-specific factor; COG:COG3730: Phosphotransferase system sorbitol-specific component IIC [Carbohydrate transport and metabolism]; Pfam:PF03608:Phosphotransferase system, enzyme II sorbitol-specific factor; PIRSF:PIRSF038321:Phosphotransferase system, enzyme II sorbitol-specific factor; ProSiteProfiles:PS51107:Phosphotransferase system, enzyme II sorbitol-specific factor.
  
    0.423
AHY46221.1
NAD dependent epimerase/dehydratase family; COG:COG0451: Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis outer membrane / Carbohydrate transport and metabolism]; Pfam:PF01370:NAD-dependent epimerase/dehydratase; SUPERFAMILY:SSF51735:No Description.
 
   0.413
AHY45525.1
COG:COG0331: (acyl-carrier-protein) S-malonyltransferase [Lipid metabolism]; Pfam:PF00698:Acyl transferase; Pfam:PF00698:Acyl transferase; SMART:SM00827:Polyketide synthase, acyl transferase domain; SUPERFAMILY:SSF52151:Acyl transferase/acyl hydrolase/lysophospholipase.
 
 
 0.403
AHY46668.1
COG:COG0331: (acyl-carrier-protein) S-malonyltransferase [Lipid metabolism]; Pfam:PF00698:Acyl transferase; Pfam:PF00698:Acyl transferase; PIRSF:PIRSF000446:Malonyl CoA-acyl carrier protein transacylase; SMART:SM00827:Polyketide synthase, acyl transferase domain; SUPERFAMILY:SSF52151:Acyl transferase/acyl hydrolase/lysophospholipase.
 
 
 0.403
AHY45801.1
1-PFK: hexose kinase, 1-phosphofructokinase family; TIGRFAM:TIGR03168:Tagatose/fructose phosphokinase; COG:COG1105: Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) [Carbohydrate transport and metabolism]; Pfam:PF00294:Carbohydrate kinase PfkB; PIRSF:PIRSF000535:Tagatose/fructose phosphokinase; ProSitePatterns:PS00583:Carbohydrate/puine kinase, PfkB, conserved site; SUPERFAMILY:SSF53613:No Description;KEGG: 00052; UniPathway: UPA00704.
   
    0.402
AHY46938.1
1-PFK: hexose kinase, 1-phosphofructokinase family; TIGRFAM:TIGR03168:Tagatose/fructose phosphokinase; COG:COG1105: Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) [Carbohydrate transport and metabolism]; Pfam:PF00294:Carbohydrate kinase PfkB; PIRSF:PIRSF000535:Tagatose/fructose phosphokinase; ProSitePatterns:PS00584:Carbohydrate/puine kinase, PfkB, conserved site; SUPERFAMILY:SSF53613:No Description;KEGG: 00052; UniPathway: UPA00704.
   
    0.402
Your Current Organism:
Rubrobacter radiotolerans
NCBI taxonomy Id: 42256
Other names: ATCC 51242, Arthrobacter radiotolerans, CIP 106991, DSM 46359, DSM 5868, IAM 12072, IFO 14777, JCM 2153, NBRC 14777, R. radiotolerans, strain P-1
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