STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHY46221.1NAD dependent epimerase/dehydratase family; COG:COG0451: Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis outer membrane / Carbohydrate transport and metabolism]; Pfam:PF01370:NAD-dependent epimerase/dehydratase; SUPERFAMILY:SSF51735:No Description. (352 aa)    
Predicted Functional Partners:
AHY45743.1
TIGRFAM:TIGR03026:Nucleotide sugar dehydrogenase; COG:COG1004: Predicted UDP-glucose 6-dehydrogenase [Cell envelope biogenesis outer membrane]; Pfam:PF03721:UDP-glucose/GDP-mannose dehydrogenase, N-terminal; PIRSF:PIRSF000124:Nucleotide sugar dehydrogenase; SMART:SM00984:UDP-glucose/GDP-mannose dehydrogenase, C-terminal; SUPERFAMILY:SSF51735:No Description.
  
 0.935
AHY47102.1
TIGRFAM:TIGR01179:UDP-glucose 4-epimerase GalE; COG:COG1087: UDP-glucose 4-epimerase [Cell envelope biogenesis outer membrane]; Pfam:PF01370:NAD-dependent epimerase/dehydratase; SUPERFAMILY:SSF51735:No Description;KEGG: 00052; KEGG: 00520; MetaCyc: PWY-6317; UniPathway: UPA00214; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
  
 0.913
AHY47103.1
TIGRFAM:TIGR00209:Galactose-1-phosphate uridyl transferase, class I; COG:COG1085: Galactose-1-phosphate uridylyltransferase [Energy production and conversion]; Pfam:PF01087:Galactose-1-phosphate uridyl transferase, N-terminal; PIRSF:PIRSF000808:Galactose-1-phosphate uridyl transferase, class I; ProSitePatterns:PS00117:Galactose-1-phosphate uridyl transferase, class I His-active site; SUPERFAMILY:SSF54197:HIT-like domain;KEGG: 00052; KEGG: 00520; MetaCyc: PWY-6317; UniPathway: UPA00214; galT_1.
   
 
 0.905
AHY45778.1
COG:COG0451: Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis outer membrane / Carbohydrate transport and metabolism]; Pfam:PF01370:NAD-dependent epimerase/dehydratase; Pfam:PF01370:NAD-dependent epimerase/dehydratase; SUPERFAMILY:SSF51735:No Description.
     
  0.900
AHY46555.1
NAD dependent epimerase/dehydratase family; COG:COG0451: Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis outer membrane / Carbohydrate transport and metabolism]; Pfam:PF01370:NAD-dependent epimerase/dehydratase; SUPERFAMILY:SSF51735:No Description.
     
  0.900
AHY47617.1
COG:COG1087: UDP-glucose 4-epimerase [Cell envelope biogenesis outer membrane]; Pfam:PF01370:NAD-dependent epimerase/dehydratase; Pfam:PF01370:NAD-dependent epimerase/dehydratase; SUPERFAMILY:SSF51735:No Description.
     
  0.900
AHY46222.1
COG:COG1063: Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only]; Pfam:PF08240:Alcohol dehydrogenase GroES-like; Pfam:PF08240:Alcohol dehydrogenase GroES-like; ProSitePatterns:PS00059:Alcohol dehydrogenase, zinc-type, conserved site; SUPERFAMILY:SSF50129:GroES-like.
 
    0.830
AHY46764.1
Hypothetical Protein; Ab initio prediction:Prodigal:2.60.
  
  0.829
AHY46223.1
Hypothetical Protein; Ab initio prediction:Prodigal:2.60.
       0.668
AHY46227.1
COG:COG0491: Zn-dependent hydrolases including glyoxylases [General function prediction only]; Pfam:PF00753:Beta-lactamase-like; Pfam:PF00753:Beta-lactamase-like; SMART:SM00849:Beta-lactamase-like; SUPERFAMILY:SSF56281:No Description.
 
    0.637
Your Current Organism:
Rubrobacter radiotolerans
NCBI taxonomy Id: 42256
Other names: ATCC 51242, Arthrobacter radiotolerans, CIP 106991, DSM 46359, DSM 5868, IAM 12072, IFO 14777, JCM 2153, NBRC 14777, R. radiotolerans, strain P-1
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