STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHY46240.1Hypothetical Protein; Ab initio prediction:Prodigal:2.60. (156 aa)    
Predicted Functional Partners:
AHY46977.1
Fusaric acid resistance protein-like; COG:COG4129: Predicted membrane protein [Function unknown]; Pfam:PF13515:Fusaric acid resistance protein-like.
  
     0.697
AHY47572.1
Fusaric acid resistance protein-like; COG:COG4129: Predicted membrane protein [Function unknown]; Pfam:PF13515:Fusaric acid resistance protein-like.
  
     0.667
AHY47260.1
Fusaric acid resistance protein-like; COG:COG4129: Predicted membrane protein [Function unknown]; Pfam:PF13515:Fusaric acid resistance protein-like.
  
     0.664
AHY46241.1
Hypothetical Protein; Ab initio prediction:Prodigal:2.60.
       0.588
AHY46239.1
MarR family; COG:COG1846: Transcriptional regulators [Transcription]; Pfam:PF12802:MarR family; PRINTS:PR00598:Transcription regulator HTH, MarR-type; ProSiteProfiles:PS50995:Transcription regulator HTH, MarR-type; SMART:SM00347:Transcription regulator HTH, MarR-type; SUPERFAMILY:SSF46785:No Description.
 
     0.568
zwf-2
Zwf: glucose-6-phosphate dehydrogenase; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone.
       0.513
AHY46243.1
COG:COG4288: Uncharacterized protein conserved in bacteria [Function unknown]; Pfam:PF07100:Protein of unknown function DUF1362; Pfam:PF07100:Protein of unknown function DUF1362; PIRSF:PIRSF008711:Protein of unknown function DUF1362; SUPERFAMILY:SSF89232:Protein of unknown function DUF1362.
       0.513
AHY46723.1
MerR HTH family regulatory protein; COG:COG0789: Predicted transcriptional regulators [Transcription]; Pfam:PF13411:MerR HTH family regulatory protein; ProSiteProfiles:PS50937:Transcription regulator HTH, MerR; SMART:SM00422:Transcription regulator HTH, MerR; SUPERFAMILY:SSF46955:DNA binding domain, putative.
  
    0.507
AHY46320.1
COG:COG2047: Uncharacterized protein (ATP-grasp superfamily) [General function prediction only]; Pfam:PF09754:Proteasome assembly chaperone 2; Pfam:PF09754:Proteasome assembly chaperone 2; PIRSF:PIRSF028754:Protein of unknown function DUF774; SUPERFAMILY:SSF159659:No Description.
  
     0.462
AHY47640.1
COG:COG3428: Predicted membrane protein [Function unknown]; Pfam:PF03703:Bacterial PH domain; Pfam:PF03703:Bacterial PH domain; PIRSF:PIRSF026631:Uncharacterised conserved protein UCP026631.
  
    0.454
Your Current Organism:
Rubrobacter radiotolerans
NCBI taxonomy Id: 42256
Other names: ATCC 51242, Arthrobacter radiotolerans, CIP 106991, DSM 46359, DSM 5868, IAM 12072, IFO 14777, JCM 2153, NBRC 14777, R. radiotolerans, strain P-1
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