STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHY46241.1Hypothetical Protein; Ab initio prediction:Prodigal:2.60. (108 aa)    
Predicted Functional Partners:
zwf-2
Zwf: glucose-6-phosphate dehydrogenase; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone.
       0.668
AHY46243.1
COG:COG4288: Uncharacterized protein conserved in bacteria [Function unknown]; Pfam:PF07100:Protein of unknown function DUF1362; Pfam:PF07100:Protein of unknown function DUF1362; PIRSF:PIRSF008711:Protein of unknown function DUF1362; SUPERFAMILY:SSF89232:Protein of unknown function DUF1362.
       0.668
AHY46240.1
Hypothetical Protein; Ab initio prediction:Prodigal:2.60.
       0.588
AHY46244.1
COG:COG1502: Phosphatidylserine/phosphatidylglycerophosphate/cardiolipi n synthases and related enzymes [Lipid metabolism]; Pfam:PF13091:Phospholipase D-like domain; Pfam:PF13091:Phospholipase D-like domain; ProSiteProfiles:PS50035:Phospholipase D/Transphosphatidylase; SMART:SM00155:Phospholipase D/Transphosphatidylase; SUPERFAMILY:SSF56024:No Description.
       0.501
AHY46239.1
MarR family; COG:COG1846: Transcriptional regulators [Transcription]; Pfam:PF12802:MarR family; PRINTS:PR00598:Transcription regulator HTH, MarR-type; ProSiteProfiles:PS50995:Transcription regulator HTH, MarR-type; SMART:SM00347:Transcription regulator HTH, MarR-type; SUPERFAMILY:SSF46785:No Description.
       0.400
Your Current Organism:
Rubrobacter radiotolerans
NCBI taxonomy Id: 42256
Other names: ATCC 51242, Arthrobacter radiotolerans, CIP 106991, DSM 46359, DSM 5868, IAM 12072, IFO 14777, JCM 2153, NBRC 14777, R. radiotolerans, strain P-1
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