STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHY46252.1COG:COG2206: HD-GYP domain [Signal transduction mechanisms]; Pfam:PF01966:HD domain; SUPERFAMILY:SSF109604:No Description. (470 aa)    
Predicted Functional Partners:
AHY47708.1
GGDEF: diguanylate cyclase (GGDEF) domain; TIGRFAM:TIGR00254:GGDEF domain; COG:COG3706: Response regulator containing a CheY-like receiver domain and a GGDEF domain [Signal transduction mechanisms]; Pfam:PF00990:GGDEF domain; ProSiteProfiles:PS50887:GGDEF domain; SMART:SM00267:GGDEF domain; SUPERFAMILY:SSF55073:Adenylyl cyclase class-3/4/guanylyl cyclase.
   
 0.895
AHY46220.1
GGDEF: diguanylate cyclase (GGDEF) domain; TIGRFAM:TIGR00254:GGDEF domain; COG:COG2199: FOG: GGDEF domain [Signal transduction mechanisms]; Pfam:PF00990:GGDEF domain; ProSiteProfiles:PS50113:PAS-associated, C-terminal; SMART:SM00267:GGDEF domain; SUPERFAMILY:SSF55073:Adenylyl cyclase class-3/4/guanylyl cyclase.
 
 0.833
AHY47118.1
GGDEF: diguanylate cyclase (GGDEF) domain; TIGRFAM:TIGR00254:GGDEF domain; COG:COG5001: Predicted signal transduction protein containing a membrane domain an EAL and a GGDEF domain [Signal transduction mechanisms]; Pfam:PF00563:Diguanylate phosphodiesterase, EAL domain; ProSiteProfiles:PS50113:PAS-associated, C-terminal; SMART:SM00052:Diguanylate phosphodiesterase, EAL domain; SUPERFAMILY:SSF141868:Diguanylate phosphodiesterase, EAL domain.
 
 0.799
AHY46004.1
TIGRFAM:TIGR00229:PAS domain; COG:COG2200: FOG: EAL domain [Signal transduction mechanisms]; Pfam:PF00563:Diguanylate phosphodiesterase, EAL domain; ProSiteProfiles:PS50113:PAS-associated, C-terminal; SMART:SM00052:Diguanylate phosphodiesterase, EAL domain; SUPERFAMILY:SSF141868:Diguanylate phosphodiesterase, EAL domain; sensory_box.
 
 
 0.796
AHY45921.1
EAL domain; COG:COG2200: FOG: EAL domain [Signal transduction mechanisms]; Pfam:PF00563:Diguanylate phosphodiesterase, EAL domain; ProSiteProfiles:PS50883:Diguanylate phosphodiesterase, EAL domain; SMART:SM00052:Diguanylate phosphodiesterase, EAL domain; SUPERFAMILY:SSF141868:Diguanylate phosphodiesterase, EAL domain.
 
 
 0.781
AHY46231.1
GGDEF: diguanylate cyclase (GGDEF) domain; TIGRFAM:TIGR00254:GGDEF domain; COG:COG2199: FOG: GGDEF domain [Signal transduction mechanisms]; Pfam:PF00990:GGDEF domain; ProSiteProfiles:PS50887:GGDEF domain; SMART:SM00267:GGDEF domain; SUPERFAMILY:SSF55073:Adenylyl cyclase class-3/4/guanylyl cyclase.
   
 0.775
AHY47824.1
GGDEF: diguanylate cyclase (GGDEF) domain; TIGRFAM:TIGR00254:GGDEF domain; COG:COG5001: Predicted signal transduction protein containing a membrane domain an EAL and a GGDEF domain [Signal transduction mechanisms]; Pfam:PF00563:Diguanylate phosphodiesterase, EAL domain; ProSiteProfiles:PS50113:PAS-associated, C-terminal; SMART:SM00052:Diguanylate phosphodiesterase, EAL domain; SUPERFAMILY:SSF141868:Diguanylate phosphodiesterase, EAL domain.
 
  
 0.751
AHY45671.1
GGDEF: diguanylate cyclase (GGDEF) domain; TIGRFAM:TIGR00254:GGDEF domain; COG:COG5001: Predicted signal transduction protein containing a membrane domain an EAL and a GGDEF domain [Signal transduction mechanisms]; Pfam:PF00563:Diguanylate phosphodiesterase, EAL domain; ProSiteProfiles:PS50113:PAS-associated, C-terminal; SMART:SM00052:Diguanylate phosphodiesterase, EAL domain; SUPERFAMILY:SSF141868:Diguanylate phosphodiesterase, EAL domain.
   
 0.741
AHY45427.1
GGDEF: diguanylate cyclase (GGDEF) domain; TIGRFAM:TIGR00254:GGDEF domain; COG:COG5001: Predicted signal transduction protein containing a membrane domain an EAL and a GGDEF domain [Signal transduction mechanisms]; Pfam:PF00563:Diguanylate phosphodiesterase, EAL domain; ProSiteProfiles:PS50887:GGDEF domain; SMART:SM00052:Diguanylate phosphodiesterase, EAL domain; SUPERFAMILY:SSF141868:Diguanylate phosphodiesterase, EAL domain.
   
 0.740
AHY46155.1
GGDEF: diguanylate cyclase (GGDEF) domain; TIGRFAM:TIGR00254:GGDEF domain; COG:COG5001: Predicted signal transduction protein containing a membrane domain an EAL and a GGDEF domain [Signal transduction mechanisms]; Pfam:PF00563:Diguanylate phosphodiesterase, EAL domain; ProSiteProfiles:PS50113:PAS-associated, C-terminal; SMART:SM00052:Diguanylate phosphodiesterase, EAL domain; SUPERFAMILY:SSF141868:Diguanylate phosphodiesterase, EAL domain.
   
 0.721
Your Current Organism:
Rubrobacter radiotolerans
NCBI taxonomy Id: 42256
Other names: ATCC 51242, Arthrobacter radiotolerans, CIP 106991, DSM 46359, DSM 5868, IAM 12072, IFO 14777, JCM 2153, NBRC 14777, R. radiotolerans, strain P-1
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.