STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHY46286.1COG:COG1055: Na+/H+ antiporter NhaD and related arsenite permeases [Inorganic ion transport and metabolism]; Pfam:PF02040:Arsenite/antimonite efflux pump membrane protein, ArsB; Pfam:PF02040:Arsenite/antimonite efflux pump membrane protein, ArsB; PRINTS:PR00758:Arsenite/antimonite efflux pump membrane protein, ArsB. (427 aa)    
Predicted Functional Partners:
AHY46287.1
Universal stress protein family; Pfam:PF00582:UspA; SUPERFAMILY:SSF52402:No Description.
       0.658
AHY46285.1
COG:COG1824: Permease similar to cation transporters [Inorganic ion transport and metabolism]; Pfam:PF01769:SLC41 divalent cation transporters, integral membrane domain; SUPERFAMILY:SSF161093:No Description.
       0.529
AHY47314.1
COG:COG0475: Kef-type K+ transport systems membrane components [Inorganic ion transport and metabolism]; Pfam:PF00999:Cation/H+ exchanger; Pfam:PF00999:Cation/H+ exchanger.
     
 0.469
AHY46284.1
TrkA-C domain; COG:COG3273: Uncharacterized conserved protein [Function unknown]; Pfam:PF02080:Regulator of K+ conductance, C-terminal; ProSiteProfiles:PS51202:Regulator of K+ conductance, C-terminal; SUPERFAMILY:SSF116726:No Description.
  
    0.467
guaA
GMP synthase (glutamine-hydrolyzing), C-terminal domain; Catalyzes the synthesis of GMP from XMP.
  
    0.433
AHY46980.1
Heavy metal translocating P-type ATPase; TIGRFAM:TIGR01525:Cation-transporting P-type ATPase, subfamily IB; COG:COG2217: Cation transport ATPase [Inorganic ion transport and metabolism]; Pfam:PF00122:P-type ATPase, A domain; PRINTS:PR00119:Cation-transporting P-type ATPase; ProSitePatterns:PS01047:Heavy-metal-associated, conserved site; ProSiteProfiles:PS50846:Heavy metal-associated domain, HMA; SUPERFAMILY:SSF56784:HAD-like domain; ATPase-IB_hvy.
     
 0.418
Your Current Organism:
Rubrobacter radiotolerans
NCBI taxonomy Id: 42256
Other names: ATCC 51242, Arthrobacter radiotolerans, CIP 106991, DSM 46359, DSM 5868, IAM 12072, IFO 14777, JCM 2153, NBRC 14777, R. radiotolerans, strain P-1
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