STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHY46292.1COG:COG0400: Predicted esterase [General function prediction only]; Pfam:PF12695:Alpha/beta hydrolase family; Pfam:PF12695:Alpha/beta hydrolase family; SUPERFAMILY:SSF53474:No Description. (211 aa)    
Predicted Functional Partners:
AHY46293.1
Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; COG:COG0346: Lactoylglutathione lyase and related lyases [Amino acid transport and metabolism]; Pfam:PF00903:Glyoxalase/fosfomycin resistance/dioxygenase domain; SUPERFAMILY:SSF54593:No Description.
  
 0.996
AHY47295.1
Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; COG:COG2514: Predicted ring-cleavage extradiol dioxygenase [General function prediction only]; Pfam:PF00903:Glyoxalase/fosfomycin resistance/dioxygenase domain; SUPERFAMILY:SSF54593:No Description.
    0.976
AHY46291.1
COG:COG3803: Uncharacterized protein conserved in bacteria [Function unknown]; Pfam:PF06041:Protein of unknown function DUF924; Pfam:PF06041:Protein of unknown function DUF924; SUPERFAMILY:SSF48452:No Description.
       0.752
AHY45881.1
COG:COG2514: Predicted ring-cleavage extradiol dioxygenase [General function prediction only]; Pfam:PF00903:Glyoxalase/fosfomycin resistance/dioxygenase domain; Pfam:PF00903:Glyoxalase/fosfomycin resistance/dioxygenase domain; SUPERFAMILY:SSF54593:No Description.
 
  
 0.622
AHY46294.1
COG:COG3592: Uncharacterized conserved protein [Function unknown]; Pfam:PF06902:Ferredoxin soy-like; SMART:SM00704:Iron sulphur-containing domain, CDGSH-type, subfamily; SUPERFAMILY:SSF54862:No Description.
       0.543
AHY45753.1
TIGRFAM:TIGR00121:Biotin--acetyl-CoA-carboxylase ligase; COG:COG0340: Biotin-(acetyl-CoA carboxylase) ligase [Coenzyme metabolism]; Pfam:PF03099:Biotin/lipoate A/B protein ligase; SUPERFAMILY:SSF55681:No Description;KEGG: 00780; birA_ligase.
  
  
 0.532
AHY46853.1
COG:COG1143: Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) [Energy production and conversion]; Pfam:PF12838:4Fe-4S binding domain; Pfam:PF12838:4Fe-4S binding domain; ProSitePatterns:PS00198:4Fe-4S ferredoxin, iron-sulphur binding, conserved site; ProSiteProfiles:PS51379:4Fe-4S ferredoxin-type, iron-sulpur binding domain; SUPERFAMILY:SSF54862:No Description.
  
  
 0.502
nuoD
NADH:ubiquinone oxidoreductase 49 kD subunit 7; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 49 kDa subunit family.
  
  
 0.470
AHY47376.1
GDSL-like Lipase/Acylhydrolase family; COG:COG2755: Lysophospholipase L1 and related esterases [Amino acid transport and metabolism]; Pfam:PF13472:GDSL-like Lipase/Acylhydrolase family; SUPERFAMILY:SSF52266:No Description.
 
   
 0.460
msrA
msrA: peptide-methionine (S)-S-oxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
  
  
 0.442
Your Current Organism:
Rubrobacter radiotolerans
NCBI taxonomy Id: 42256
Other names: ATCC 51242, Arthrobacter radiotolerans, CIP 106991, DSM 46359, DSM 5868, IAM 12072, IFO 14777, JCM 2153, NBRC 14777, R. radiotolerans, strain P-1
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