STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHY46293.1Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; COG:COG0346: Lactoylglutathione lyase and related lyases [Amino acid transport and metabolism]; Pfam:PF00903:Glyoxalase/fosfomycin resistance/dioxygenase domain; SUPERFAMILY:SSF54593:No Description. (313 aa)    
Predicted Functional Partners:
AHY46292.1
COG:COG0400: Predicted esterase [General function prediction only]; Pfam:PF12695:Alpha/beta hydrolase family; Pfam:PF12695:Alpha/beta hydrolase family; SUPERFAMILY:SSF53474:No Description.
  
 0.996
AHY46291.1
COG:COG3803: Uncharacterized protein conserved in bacteria [Function unknown]; Pfam:PF06041:Protein of unknown function DUF924; Pfam:PF06041:Protein of unknown function DUF924; SUPERFAMILY:SSF48452:No Description.
       0.752
AHY46294.1
COG:COG3592: Uncharacterized conserved protein [Function unknown]; Pfam:PF06902:Ferredoxin soy-like; SMART:SM00704:Iron sulphur-containing domain, CDGSH-type, subfamily; SUPERFAMILY:SSF54862:No Description.
       0.555
AHY45881.1
COG:COG2514: Predicted ring-cleavage extradiol dioxygenase [General function prediction only]; Pfam:PF00903:Glyoxalase/fosfomycin resistance/dioxygenase domain; Pfam:PF00903:Glyoxalase/fosfomycin resistance/dioxygenase domain; SUPERFAMILY:SSF54593:No Description.
  
  
 0.552
AHY46347.1
TIGRFAM:TIGR02425:4-carboxymuconolactone decarboxylase; COG:COG0599: Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit [Function unknown]; Pfam:PF02627:Carboxymuconolactone decarboxylase; SUPERFAMILY:SSF69118:No Description;KEGG: 00362; UniPathway: UPA00157; decarb_PcaC.
  
  
 0.530
AHY46853.1
COG:COG1143: Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) [Energy production and conversion]; Pfam:PF12838:4Fe-4S binding domain; Pfam:PF12838:4Fe-4S binding domain; ProSitePatterns:PS00198:4Fe-4S ferredoxin, iron-sulphur binding, conserved site; ProSiteProfiles:PS51379:4Fe-4S ferredoxin-type, iron-sulpur binding domain; SUPERFAMILY:SSF54862:No Description.
  
  
 0.498
AHY46296.1
Putative transposase of IS4/5 family (DUF4096); COG:COG3293: Transposase and inactivated derivatives [DNA replication recombination and repair]; Pfam:PF13340:Putative transposase IS4/IS5 family.
     
 0.494
AHY46165.1
TIGRFAM:TIGR03668:F420-dependent enzyme, PPOX class, family Rv0121, probable; COG:COG0778: Nitroreductase [Energy production and conversion]; Pfam:PF00881:Nitroreductase-like; SUPERFAMILY:SSF55469:Nitroreductase-like.
  
  
 0.475
AHY47398.1
NOT-MenG: RraA family; Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions.
     
 0.458
AHY45624.1
MerR HTH family regulatory protein; COG:COG0789: Predicted transcriptional regulators [Transcription]; Pfam:PF13411:MerR HTH family regulatory protein; ProSitePatterns:PS00552:Transcription regulator HTH, MerR; ProSiteProfiles:PS50943:Helix-turn-helix; SMART:SM00422:Transcription regulator HTH, MerR; SUPERFAMILY:SSF51182:RmlC-like cupin domain.
  
  
 0.454
Your Current Organism:
Rubrobacter radiotolerans
NCBI taxonomy Id: 42256
Other names: ATCC 51242, Arthrobacter radiotolerans, CIP 106991, DSM 46359, DSM 5868, IAM 12072, IFO 14777, JCM 2153, NBRC 14777, R. radiotolerans, strain P-1
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