STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHY46385.1Acetyltransferase (GNAT) family; COG:COG1246: N-acetylglutamate synthase and related acetyltransferases [Amino acid transport and metabolism]; Pfam:PF00583:GNAT domain; ProSiteProfiles:PS51186:GNAT domain; SUPERFAMILY:SSF55729:Acyl-CoA N-acyltransferase. (160 aa)    
Predicted Functional Partners:
AHY46384.1
Hypothetical Protein; Ab initio prediction:Prodigal:2.60; SUPERFAMILY:SSF52833:Thioredoxin-like fold.
 
     0.679
AHY45994.1
FAD binding domain; COG:COG0654: 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme metabolism / Energy production and conversion]; Pfam:PF01494:Monooxygenase, FAD-binding; PRINTS:PR00420:Aromatic-ring hydroxylase-like; SUPERFAMILY:SSF51905:No Description.
  
    0.472
AHY46383.1
COG:COG0281: Malic enzyme [Energy production and conversion]; Pfam:PF03949:Malic enzyme, NAD-binding; Pfam:PF03949:Malic enzyme, NAD-binding; PIRSF:PIRSF000106:Malic oxidoreductase; PRINTS:PR00072:Malic oxidoreductase; ProSitePatterns:PS00331:Malic enzyme, conserved site; SMART:SM00919:Malic enzyme, NAD-binding; SUPERFAMILY:SSF51735:No Description.
       0.469
AHY47466.1
Cupin domain; COG:COG1917: Uncharacterized conserved protein contains double-stranded beta-helix domain [Function unknown]; Pfam:PF07883:Cupin 2, conserved barrel; SUPERFAMILY:SSF51182:RmlC-like cupin domain.
  
     0.454
AHY45432.1
FAD binding domain; COG:COG0644: Dehydrogenases (flavoproteins) [Energy production and conversion]; Pfam:PF01494:Monooxygenase, FAD-binding; PRINTS:PR00420:Aromatic-ring hydroxylase-like; SUPERFAMILY:SSF51905:No Description.
  
    0.421
AHY47986.1
COG:COG1132: ABC-type multidrug transport system ATPase and permease components [Defense mechanisms]; Pfam:PF00664:ABC transporter, transmembrane domain; Pfam:PF00664:ABC transporter, transmembrane domain; ProSitePatterns:PS00211:ABC transporter, conserved site; ProSiteProfiles:PS50893:ABC transporter-like; SMART:SM00382:AAA+ ATPase domain; SUPERFAMILY:SSF52540:P-loop containing nucleoside triphosphate hydrolase.
  
     0.403
Your Current Organism:
Rubrobacter radiotolerans
NCBI taxonomy Id: 42256
Other names: ATCC 51242, Arthrobacter radiotolerans, CIP 106991, DSM 46359, DSM 5868, IAM 12072, IFO 14777, JCM 2153, NBRC 14777, R. radiotolerans, strain P-1
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