STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHY46397.1COG:COG1397: ADP-ribosylglycohydrolase [Posttranslational modification protein turnover chaperones]; Pfam:PF03747:ADP-ribosylation/Crystallin J1; Pfam:PF03747:ADP-ribosylation/Crystallin J1; SUPERFAMILY:SSF101478:ADP-ribosylation/Crystallin J1. (302 aa)    
Predicted Functional Partners:
AHY47501.1
COG:COG2110: Predicted phosphatase homologous to the C-terminal domain of histone macroH2A1 [General function prediction only]; Pfam:PF01661:Appr-1-p processing; Pfam:PF01661:Appr-1-p processing; ProSiteProfiles:PS51154:Appr-1-p processing; SMART:SM00506:Appr-1-p processing; SUPERFAMILY:SSF52949:No Description.
    
 0.919
AHY46398.1
Cyclin-dependent kinase inhibitor 3 (CDKN3); COG:COG2453: Predicted protein-tyrosine phosphatase [Signal transduction mechanisms]; Pfam:PF05706:CDKN3 domain; ProSiteProfiles:PS50056:Protein-tyrosine/Dual specificity phosphatase; SUPERFAMILY:SSF52799:No Description.
 
     0.918
thiE-2
thiE: thiamine-phosphate pyrophosphorylase; Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP). Belongs to the thiamine-phosphate synthase family.
 
      0.680
AHY47444.1
COG:COG0347: Nitrogen regulatory protein PII [Amino acid transport and metabolism]; ProSiteProfiles:PS51343:Nitrogen regulatory protein PII; SMART:SM00938:Nitrogen regulatory protein PII; SUPERFAMILY:SSF54913:Nitrogen regulatory PII-like, alpha/beta.
   
 
 0.515
Your Current Organism:
Rubrobacter radiotolerans
NCBI taxonomy Id: 42256
Other names: ATCC 51242, Arthrobacter radiotolerans, CIP 106991, DSM 46359, DSM 5868, IAM 12072, IFO 14777, JCM 2153, NBRC 14777, R. radiotolerans, strain P-1
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.