STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHY46408.1ATP:dephospho-CoA triphosphoribosyl transferase; COG:COG1767: Triphosphoribosyl-dephospho-CoA synthetase [Coenzyme metabolism]; Pfam:PF01874:Triphosphoribosyl-dephospho-CoA protein;MetaCyc: PWY-5796. (301 aa)    
Predicted Functional Partners:
AHY46407.1
COG:COG1225: Peroxiredoxin [Posttranslational modification protein turnover chaperones]; Pfam:PF00578:Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant; Pfam:PF00578:Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant; PIRSF:PIRSF000239:Peroxiredoxin, AhpC-type; ProSiteProfiles:PS51352:Thioredoxin-like fold; SUPERFAMILY:SSF52833:Thioredoxin-like fold.
       0.732
AHY47535.1
COG:COG2301: Citrate lyase beta subunit [Carbohydrate transport and metabolism]; Pfam:PF03328:Aldehyde-lyase domain; Pfam:PF03328:Aldehyde-lyase domain; PIRSF:PIRSF015582:Citrate lyase, beta subunit; SUPERFAMILY:SSF51621:Pyruvate/Phosphoenolpyruvate kinase-like domain; Belongs to the HpcH/HpaI aldolase family.
  
  
 0.693
AHY46406.1
Carboxylate-amine ligase, YbdK family; ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity; Belongs to the glutamate--cysteine ligase type 2 family. YbdK subfamily.
       0.510
AHY46409.1
Hypothetical protein; COG:COG2138: Uncharacterized conserved protein [Function unknown]; Pfam:PF01903:Cobalamin (vitamin B12) biosynthesis CbiX; Pfam:PF01903:Cobalamin (vitamin B12) biosynthesis CbiX; SUPERFAMILY:SSF53800:No Description.
       0.496
AHY46410.1
Hypothetical Protein; Ab initio prediction:Prodigal:2.60.
       0.496
Your Current Organism:
Rubrobacter radiotolerans
NCBI taxonomy Id: 42256
Other names: ATCC 51242, Arthrobacter radiotolerans, CIP 106991, DSM 46359, DSM 5868, IAM 12072, IFO 14777, JCM 2153, NBRC 14777, R. radiotolerans, strain P-1
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