STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHY46410.1Hypothetical Protein; Ab initio prediction:Prodigal:2.60. (278 aa)    
Predicted Functional Partners:
AHY46409.1
Hypothetical protein; COG:COG2138: Uncharacterized conserved protein [Function unknown]; Pfam:PF01903:Cobalamin (vitamin B12) biosynthesis CbiX; Pfam:PF01903:Cobalamin (vitamin B12) biosynthesis CbiX; SUPERFAMILY:SSF53800:No Description.
      0.976
AHY47038.1
TIGRFAM:TIGR01469:Uroporphyrin-III C-methyltransferase; COG:COG0007: Uroporphyrinogen-III methylase [Coenzyme metabolism]; Pfam:PF02602:Tetrapyrrole biosynthesis, uroporphyrinogen III synthase; ProSitePatterns:PS00840:Uroporphiryn-III C-methyltransferase, conserved site; SUPERFAMILY:SSF53790:Tetrapyrrole methylase;KEGG: 00860; MetaCyc: PWY-5194; MetaCyc: PWY-5196; UniPathway: UPA00148; UniPathway: UPA00148; UniPathway: UPA00262; UniPathway: UPA00262; UniPathway: UPA00262; cobA_cysG_Cterm.
  
  
 0.667
AHY47041.1
TIGRFAM:TIGR01470:Sirohaem synthase, N-terminal; COG:COG1648: Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) [Coenzyme metabolism]; Pfam:PF13241:Sirohaem synthase, N-terminal; SUPERFAMILY:SSF51735:No Description;KEGG: 00860; MetaCyc: PWY-5194; MetaCyc: PWY-5196; UniPathway: UPA00148; UniPathway: UPA00148; UniPathway: UPA00262; UniPathway: UPA00262; UniPathway: UPA00262; cysG_Nterm.
  
  
 0.529
AHY46408.1
ATP:dephospho-CoA triphosphoribosyl transferase; COG:COG1767: Triphosphoribosyl-dephospho-CoA synthetase [Coenzyme metabolism]; Pfam:PF01874:Triphosphoribosyl-dephospho-CoA protein;MetaCyc: PWY-5796.
       0.496
AHY46407.1
COG:COG1225: Peroxiredoxin [Posttranslational modification protein turnover chaperones]; Pfam:PF00578:Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant; Pfam:PF00578:Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant; PIRSF:PIRSF000239:Peroxiredoxin, AhpC-type; ProSiteProfiles:PS51352:Thioredoxin-like fold; SUPERFAMILY:SSF52833:Thioredoxin-like fold.
       0.472
AHY46103.1
CbiE: precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit; TIGRFAM:TIGR02467:Cobalamin (vitamin B12) biosynthesis CbiE, precorrin-6Y methyltransferase, core; COG:COG2242: Precorrin-6B methylase 2 [Coenzyme metabolism]; Pfam:PF00590:Tetrapyrrole methylase; PIRSF:PIRSF036428:Cobalamin (vitamin B12) biosynthesis CobL, precorrin-6Y C5,15-methyltransferase; SUPERFAMILY:SSF53790:Tetrapyrrole methylase.
     
 0.463
AHY46104.1
precorrin-3B C17-methyltransferase; TIGRFAM:TIGR01466:Cobalamin (vitamin B12) biosynthesis CobJ/CibH, precorrin-3B C17-methyltransferase, core; COG:COG1010: Precorrin-3B methylase [Coenzyme metabolism]; Pfam:PF00590:Tetrapyrrole methylase; SUPERFAMILY:SSF159672:No Description; cobJ_cbiH.
     
 0.460
Your Current Organism:
Rubrobacter radiotolerans
NCBI taxonomy Id: 42256
Other names: ATCC 51242, Arthrobacter radiotolerans, CIP 106991, DSM 46359, DSM 5868, IAM 12072, IFO 14777, JCM 2153, NBRC 14777, R. radiotolerans, strain P-1
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