STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHY46421.1Hypothetical Protein; Ab initio prediction:Prodigal:2.60. (112 aa)    
Predicted Functional Partners:
AHY46422.1
COG:COG0640: Predicted transcriptional regulators [Transcription]; Pfam:PF12840:Helix-turn-helix domain; Pfam:PF12840:Helix-turn-helix domain; PRINTS:PR00778:HTH ArsR-type DNA-binding domain; ProSiteProfiles:PS50987:HTH ArsR-type DNA-binding domain; SMART:SM00418:HTH ArsR-type DNA-binding domain; SUPERFAMILY:SSF46785:No Description.
 
   
 0.801
AHY46418.1
COG:COG1121: ABC-type Mn/Zn transport systems ATPase component [Inorganic ion transport and metabolism]; Pfam:PF00005:ABC transporter-like; Pfam:PF00005:ABC transporter-like; ProSitePatterns:PS00211:ABC transporter, conserved site; ProSiteProfiles:PS50893:ABC transporter-like; SMART:SM00382:AAA+ ATPase domain; SUPERFAMILY:SSF52540:P-loop containing nucleoside triphosphate hydrolase.
  
 
 0.693
AHY47507.1
COG:COG1121: ABC-type Mn/Zn transport systems ATPase component [Inorganic ion transport and metabolism]; Pfam:PF00005:ABC transporter-like; Pfam:PF00005:ABC transporter-like; ProSitePatterns:PS00211:ABC transporter, conserved site; ProSiteProfiles:PS50893:ABC transporter-like; SMART:SM00382:AAA+ ATPase domain; SUPERFAMILY:SSF52540:P-loop containing nucleoside triphosphate hydrolase.
  
 
 0.693
AHY46423.1
COG:COG0523: Putative GTPases (G3E family) [General function prediction only]; Pfam:PF02492:CobW/HypB/UreG domain; Pfam:PF02492:CobW/HypB/UreG domain; SMART:SM00833:Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal; SUPERFAMILY:SSF52540:P-loop containing nucleoside triphosphate hydrolase.
 
  
 0.626
AHY46417.1
COG:COG0803: ABC-type metal ion transport system periplasmic component/surface adhesin [Inorganic ion transport and metabolism]; Pfam:PF01297:Periplasmic solute binding protein family; Pfam:PF01297:Periplasmic solute binding protein family; PRINTS:PR00691:Adhesin B; ProSiteProfiles:PS51257:Prokaryotic membrane lipoprotein lipid attachment site profile.; SUPERFAMILY:SSF53807:No Description; Belongs to the bacterial solute-binding protein 9 family.
  
  
 0.527
AHY47508.1
COG:COG0803: ABC-type metal ion transport system periplasmic component/surface adhesin [Inorganic ion transport and metabolism]; Pfam:PF01297:Periplasmic solute binding protein family; Pfam:PF01297:Periplasmic solute binding protein family; PRINTS:PR00690:Adhesion lipoprotein; SUPERFAMILY:SSF53807:No Description; Belongs to the bacterial solute-binding protein 9 family.
  
  
 0.527
AHY45960.1
Hypothetical Protein; Ab initio prediction:Prodigal:2.60; SUPERFAMILY:SSF143597:No Description.
  
     0.422
AHY46040.1
Dolichyl-phosphate-mannose-protein mannosyltransferase; COG:COG1807: 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family [Cell envelope biogenesis outer membrane]; Pfam:PF13231:Dolichyl-phosphate-mannose-protein mannosyltransferase.
  
     0.414
AHY47767.1
Natural resistance-associated macrophage protein; COG:COG1914: Mn2+ and Fe2+ transporters of the NRAMP family [Inorganic ion transport and metabolism]; Pfam:PF01566:Natural resistance-associated macrophage like;Reactome: REACT_15518.
  
  
 0.402
AHY47770.1
COG:COG1914: Mn2+ and Fe2+ transporters of the NRAMP family [Inorganic ion transport and metabolism]; Pfam:PF01566:Natural resistance-associated macrophage like; Pfam:PF01566:Natural resistance-associated macrophage like; PRINTS:PR00447:Natural resistance-associated macrophage like.
  
  
 0.402
Your Current Organism:
Rubrobacter radiotolerans
NCBI taxonomy Id: 42256
Other names: ATCC 51242, Arthrobacter radiotolerans, CIP 106991, DSM 46359, DSM 5868, IAM 12072, IFO 14777, JCM 2153, NBRC 14777, R. radiotolerans, strain P-1
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