STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHY46486.1COG:COG2132: Putative multicopper oxidases [Secondary metabolites biosynthesis transport and catabolism]; Pfam:PF07731:Multicopper oxidase, type 2; Pfam:PF07731:Multicopper oxidase, type 2; SUPERFAMILY:SSF49503:Cupredoxin. (555 aa)    
Predicted Functional Partners:
AHY46980.1
Heavy metal translocating P-type ATPase; TIGRFAM:TIGR01525:Cation-transporting P-type ATPase, subfamily IB; COG:COG2217: Cation transport ATPase [Inorganic ion transport and metabolism]; Pfam:PF00122:P-type ATPase, A domain; PRINTS:PR00119:Cation-transporting P-type ATPase; ProSitePatterns:PS01047:Heavy-metal-associated, conserved site; ProSiteProfiles:PS50846:Heavy metal-associated domain, HMA; SUPERFAMILY:SSF56784:HAD-like domain; ATPase-IB_hvy.
 
 
 0.804
AHY46484.1
CopC domain; COG:COG2372: Uncharacterized protein homolog of Cu resistance protein CopC [General function prediction only]; Pfam:PF04234:CopC domain; SUPERFAMILY:SSF81296:Immunoglobulin E-set.
 
   
 0.786
AHY46485.1
COG:COG1276: Putative copper export protein [Inorganic ion transport and metabolism]; Pfam:PF05425:Copper resistance D; Pfam:PF05425:Copper resistance D.
     
 0.758
AHY46489.1
Hypothetical Protein; Ab initio prediction:Prodigal:2.60; SUPERFAMILY:SSF49503:Cupredoxin.
 
   
 0.709
AHY46062.1
Copper binding protein, plastocyanin/azurin family; COG:COG3794: Plastocyanin [Energy production and conversion]; Pfam:PF00127:Blue (type 1) copper domain; PRINTS:PR00155:Amicyanin; SUPERFAMILY:SSF49503:Cupredoxin.
   
 
 0.688
AHY46488.1
TIGRFAM:TIGR02227:Peptidase S26A, signal peptidase I; COG:COG0681: Signal peptidase I [Intracellular trafficking and secretion]; Pfam:PF00717:Peptidase S24/S26A/S26B; PRINTS:PR00727:Peptidase S26A, signal peptidase I; ProSitePatterns:PS00760:Peptidase S26A, signal peptidase I, lysine active site; SUPERFAMILY:SSF51306:Peptidase S24/S26A/S26B/S26C; sigpep_I_bact; Belongs to the peptidase S26 family.
   
   0.624
AHY46487.1
Hypothetical Protein; Ab initio prediction:Prodigal:2.60.
       0.618
tatC
tatC: twin arginine-targeting protein translocase TatC; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides.
    
 
 0.608
AHY46483.1
Protein of unknown function (DUF1775); COG:COG4549: Uncharacterized protein conserved in bacteria [Function unknown]; Pfam:PF07987:GLE1, N-terminal, bacteria.
       0.554
AHY46230.1
TIGRFAM:TIGR00229:PAS domain; COG:COG4585: Signal transduction histidine kinase [Signal transduction mechanisms]; Pfam:PF08447:PAS fold-3; ProSiteProfiles:PS50112:PAS domain; SMART:SM00065:GAF domain; SUPERFAMILY:SSF55785:PAS domain; sensory_box.
  
 
 0.536
Your Current Organism:
Rubrobacter radiotolerans
NCBI taxonomy Id: 42256
Other names: ATCC 51242, Arthrobacter radiotolerans, CIP 106991, DSM 46359, DSM 5868, IAM 12072, IFO 14777, JCM 2153, NBRC 14777, R. radiotolerans, strain P-1
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