STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHY46487.1Hypothetical Protein; Ab initio prediction:Prodigal:2.60. (158 aa)    
Predicted Functional Partners:
AHY46488.1
TIGRFAM:TIGR02227:Peptidase S26A, signal peptidase I; COG:COG0681: Signal peptidase I [Intracellular trafficking and secretion]; Pfam:PF00717:Peptidase S24/S26A/S26B; PRINTS:PR00727:Peptidase S26A, signal peptidase I; ProSitePatterns:PS00760:Peptidase S26A, signal peptidase I, lysine active site; SUPERFAMILY:SSF51306:Peptidase S24/S26A/S26B/S26C; sigpep_I_bact; Belongs to the peptidase S26 family.
       0.757
AHY46486.1
COG:COG2132: Putative multicopper oxidases [Secondary metabolites biosynthesis transport and catabolism]; Pfam:PF07731:Multicopper oxidase, type 2; Pfam:PF07731:Multicopper oxidase, type 2; SUPERFAMILY:SSF49503:Cupredoxin.
       0.618
AHY46489.1
Hypothetical Protein; Ab initio prediction:Prodigal:2.60; SUPERFAMILY:SSF49503:Cupredoxin.
      
0.504
AHY46483.1
Protein of unknown function (DUF1775); COG:COG4549: Uncharacterized protein conserved in bacteria [Function unknown]; Pfam:PF07987:GLE1, N-terminal, bacteria.
       0.452
AHY46484.1
CopC domain; COG:COG2372: Uncharacterized protein homolog of Cu resistance protein CopC [General function prediction only]; Pfam:PF04234:CopC domain; SUPERFAMILY:SSF81296:Immunoglobulin E-set.
       0.452
AHY46485.1
COG:COG1276: Putative copper export protein [Inorganic ion transport and metabolism]; Pfam:PF05425:Copper resistance D; Pfam:PF05425:Copper resistance D.
       0.452
Your Current Organism:
Rubrobacter radiotolerans
NCBI taxonomy Id: 42256
Other names: ATCC 51242, Arthrobacter radiotolerans, CIP 106991, DSM 46359, DSM 5868, IAM 12072, IFO 14777, JCM 2153, NBRC 14777, R. radiotolerans, strain P-1
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