STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHY46518.1Hypothetical protein; COG:COG1434: Uncharacterized conserved protein [Function unknown]; Pfam:PF02698:Domain of unknown function DUF218; Pfam:PF02698:Domain of unknown function DUF218. (198 aa)    
Predicted Functional Partners:
mobA
Molybdopterin-guanine dinucleotide biosynthesis protein A; Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo-MPT) cofactor (Moco or molybdenum cofactor) to form Mo-molybdopterin guanine dinucleotide (Mo-MGD) cofactor.
       0.778
AHY46519.1
EamA-like transporter family; COG:COG5006: Predicted permease DMT superfamily [General function prediction only]; Pfam:PF00892:Drug/metabolite transporter; SUPERFAMILY:SSF103481:No Description.
  
    0.776
AHY46515.1
COG:COG0251: Putative translation initiation inhibitor yjgF family [Translation ribosomal structure and biogenesis]; Pfam:PF01042:YjgF/Yer057p/UK114 family; Pfam:PF01042:YjgF/Yer057p/UK114 family; SUPERFAMILY:SSF55298:Endoribonuclease L-PSP/chorismate mutase-like.
  
    0.543
AHY46516.1
COG:COG1853: Conserved protein/domain typically associated with flavoprotein oxygenases DIM6/NTAB family [General function prediction only]; Pfam:PF01613:Flavin reductase-like, FMN-binding; Pfam:PF01613:Flavin reductase-like, FMN-binding; SMART:SM00903:Flavin reductase-like, FMN-binding; SUPERFAMILY:SSF50475:FMN-binding split barrel.
     
 0.521
AHY46520.1
Hypothetical Protein; Ab initio prediction:Prodigal:2.60.
       0.498
AHY47028.1
UbiA prenyltransferase family; COG:COG0382: 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases [Coenzyme metabolism]; Pfam:PF01040:UbiA prenyltransferase family; Belongs to the UbiA prenyltransferase family.
  
     0.497
Your Current Organism:
Rubrobacter radiotolerans
NCBI taxonomy Id: 42256
Other names: ATCC 51242, Arthrobacter radiotolerans, CIP 106991, DSM 46359, DSM 5868, IAM 12072, IFO 14777, JCM 2153, NBRC 14777, R. radiotolerans, strain P-1
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