STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHY46532.1TrkA-N domain; COG:COG0569: K+ transport systems NAD-binding component [Inorganic ion transport and metabolism]; Pfam:PF02254:Regulator of K+ conductance, N-terminal; PRINTS:PR00335:Potassium uptake protein TrkA; ProSiteProfiles:PS51201:Regulator of K+ conductance, N-terminal; SUPERFAMILY:SSF51735:No Description. (441 aa)    
Predicted Functional Partners:
AHY46531.1
COG:COG0168: Trk-type K+ transport systems membrane components [Inorganic ion transport and metabolism]; Pfam:PF02386:Cation transporter; Pfam:PF02386:Cation transporter; PIRSF:PIRSF006247:Potassium uptake protein TrkH family.
 
 
 0.980
AHY46533.1
Tellurite resistance protein TehB; COG:COG2230: Cyclopropane fatty acid synthase and related methyltransferases [Cell envelope biogenesis outer membrane]; Pfam:PF03848:Tellurite resistance methyltransferase TehB-like domain; SUPERFAMILY:SSF53335:No Description.
   
   0.575
AHY46530.1
Pfam:PF05901:Excalibur calcium-binding domain; SMART:SM00894:Excalibur calcium-binding domain.
       0.499
AHY45672.1
COG:COG0314: Molybdopterin converting factor large subunit [Coenzyme metabolism]; Pfam:PF02391:Molybdopterin biosynthesis MoaE; Pfam:PF02391:Molybdopterin biosynthesis MoaE; SUPERFAMILY:SSF54690:Molybdopterin biosynthesis MoaE.
   
    0.468
AHY47038.1
TIGRFAM:TIGR01469:Uroporphyrin-III C-methyltransferase; COG:COG0007: Uroporphyrinogen-III methylase [Coenzyme metabolism]; Pfam:PF02602:Tetrapyrrole biosynthesis, uroporphyrinogen III synthase; ProSitePatterns:PS00840:Uroporphiryn-III C-methyltransferase, conserved site; SUPERFAMILY:SSF53790:Tetrapyrrole methylase;KEGG: 00860; MetaCyc: PWY-5194; MetaCyc: PWY-5196; UniPathway: UPA00148; UniPathway: UPA00148; UniPathway: UPA00262; UniPathway: UPA00262; UniPathway: UPA00262; cobA_cysG_Cterm.
  
    0.455
fmt
Fmt: methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family.
 
  
 0.452
selA
selA: L-seryl-tRNA selenium transferase; Converts seryl-tRNA(Sec) to selenocysteinyl-tRNA(Sec) required for selenoprotein biosynthesis.
   
    0.412
Your Current Organism:
Rubrobacter radiotolerans
NCBI taxonomy Id: 42256
Other names: ATCC 51242, Arthrobacter radiotolerans, CIP 106991, DSM 46359, DSM 5868, IAM 12072, IFO 14777, JCM 2153, NBRC 14777, R. radiotolerans, strain P-1
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