STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHY46594.1COG:COG1228: Imidazolonepropionase and related amidohydrolases [Secondary metabolites biosynthesis transport and catabolism]; Pfam:PF01979:Amidohydrolase 1; Pfam:PF01979:Amidohydrolase 1; SUPERFAMILY:SSF51556:No Description. (418 aa)    
Predicted Functional Partners:
AHY46957.1
TIGRFAM:TIGR01891:Amidohydrolase; COG:COG1473: Metal-dependent amidase/aminoacylase/carboxypeptidase [General function prediction only]; Pfam:PF07687:Peptidase M20, dimerisation domain; PIRSF:PIRSF037227:Aminobenzoyl-glutamate utilization protein B; SUPERFAMILY:SSF53187:No Description.
 
   
 0.604
AHY46595.1
COG:COG3622: Hydroxypyruvate isomerase [Carbohydrate transport and metabolism]; Pfam:PF01261:Xylose isomerase-like, TIM barrel domain; Pfam:PF01261:Xylose isomerase-like, TIM barrel domain; PIRSF:PIRSF006241:Hydroxypyruvate isomerase-like; SUPERFAMILY:SSF51658:Xylose isomerase-like, TIM barrel domain; Belongs to the hyi family.
       0.470
AHY45470.1
COG:COG1506: Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]; Pfam:PF00326:Peptidase S9, prolyl oligopeptidase, catalytic domain; Pfam:PF00326:Peptidase S9, prolyl oligopeptidase, catalytic domain; PRINTS:PR00862:Peptidase S9A, prolyl oligopeptidase; SUPERFAMILY:SSF53474:No Description.
 
     0.469
AHY45631.1
TIGRFAM:TIGR01230:Agmatinase-related; COG:COG0010: Arginase/agmatinase/formimionoglutamate hydrolase arginase family [Amino acid transport and metabolism]; Pfam:PF00491:Ureohydrolase; PIRSF:PIRSF036979:Ureohydrolase; PRINTS:PR00116:Ureohydrolase; ProSitePatterns:PS01053:Ureohydrolase, manganese-binding site; ProSiteProfiles:PS51409:Ureohydrolase; SUPERFAMILY:SSF52768:No Description;KEGG: 00330; MetaCyc: PWY-6305; UniPathway: UPA00534; Belongs to the arginase family.
  
  
 0.465
AHY46529.1
Arginase; TIGRFAM:TIGR01229:Arginase; COG:COG0010: Arginase/agmatinase/formimionoglutamate hydrolase arginase family [Amino acid transport and metabolism]; Pfam:PF00491:Ureohydrolase; PIRSF:PIRSF036979:Ureohydrolase; PRINTS:PR00116:Ureohydrolase; ProSitePatterns:PS01053:Ureohydrolase, manganese-binding site; ProSiteProfiles:PS51409:Ureohydrolase; SUPERFAMILY:SSF52768:No Description;KEGG: 00330; MetaCyc: PWY-31; MetaCyc: PWY-4984; Reactome: REACT_13; UniPathway: UPA00158; rocF_arginase; Belongs to the arginase family.
  
  
 0.465
AHY46596.1
TIGRFAM:TIGR01505:2-hydroxy-3-oxopropionate reductase; COG:COG2084: 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases [Lipid metabolism]; Pfam:PF03446:6-phosphogluconate dehydrogenase, NADP-binding; PIRSF:PIRSF000103:Hydroxy monocarboxylic acid anion dehydrogenase, HIBADH-type; ProSitePatterns:PS00895:3-hydroxyisobutyrate dehydrogenase-related, conserved site; SUPERFAMILY:SSF51735:No Description;KEGG: 00630; tartro_sem_red.
       0.434
Your Current Organism:
Rubrobacter radiotolerans
NCBI taxonomy Id: 42256
Other names: ATCC 51242, Arthrobacter radiotolerans, CIP 106991, DSM 46359, DSM 5868, IAM 12072, IFO 14777, JCM 2153, NBRC 14777, R. radiotolerans, strain P-1
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.