STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHY46692.1COG:COG0575: CDP-diglyceride synthetase [Lipid metabolism]; Pfam:PF01148:Phosphatidate cytidylyltransferase; Pfam:PF01148:Phosphatidate cytidylyltransferase; ProSitePatterns:PS01315:Phosphatidate cytidylyltransferase; Belongs to the CDS family. (256 aa)    
Predicted Functional Partners:
AHY46691.1
uppS: di-trans,poly-cis-decaprenylcistransferase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids.
 
  
 0.974
AHY46465.1
pgsA: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; TIGRFAM:TIGR00560:CDP-diacylglycerol--glycerol-3- phosphate 3-phosphatidyltransferase; COG:COG0558: Phosphatidylglycerophosphate synthase [Lipid metabolism]; Pfam:PF01066:CDP-alcohol phosphatidyltransferase; PIRSF:PIRSF000847:CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; ProSitePatterns:PS00379:CDP-alcohol phosphatidyltransferase;KEGG: 00564; MetaCyc: PWY-5668; UniPathway: UPA00084; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
 
  
 0.945
AHY46728.1
COG:COG0204: 1-acyl-sn-glycerol-3-phosphate acyltransferase [Lipid metabolism]; Pfam:PF01553:Phospholipid/glycerol acyltransferase; Pfam:PF01553:Phospholipid/glycerol acyltransferase; SMART:SM00563:Phospholipid/glycerol acyltransferase; SUPERFAMILY:SSF69593:No Description.
    
 0.942
AHY45436.1
pssA: CDP-diacylglycerol-serine O-phosphatidyltransferase; TIGRFAM:TIGR00473:CDP-diacylglycerol--serine O-phosphatidyltransferase; COG:COG1183: Phosphatidylserine synthase [Lipid metabolism]; Pfam:PF01066:CDP-alcohol phosphatidyltransferase; ProSitePatterns:PS00379:CDP-alcohol phosphatidyltransferase;KEGG: 00260; KEGG: 00564; MetaCyc: PWY-5669; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
 
  
 0.934
AHY45542.1
COG:COG0558: Phosphatidylglycerophosphate synthase [Lipid metabolism]; Pfam:PF01066:CDP-alcohol phosphatidyltransferase; Pfam:PF01066:CDP-alcohol phosphatidyltransferase; ProSitePatterns:PS00379:CDP-alcohol phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
    
 0.932
AHY46798.1
COG:COG0818: Diacylglycerol kinase [Cell envelope biogenesis outer membrane]; Pfam:PF01219:Diacylglycerol kinase, prokaryotic; Pfam:PF01219:Diacylglycerol kinase, prokaryotic; ProSitePatterns:PS01069:Diacylglycerol kinase, prokaryotic.
    
 0.914
AHY45416.1
COG:COG1183: Phosphatidylserine synthase [Lipid metabolism]; Pfam:PF01066:CDP-alcohol phosphatidyltransferase; Pfam:PF01066:CDP-alcohol phosphatidyltransferase; PIRSF:PIRSF000851:Phosphatidylcholine synthase Pcs.
    
 0.912
dxr
Dxr: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4- phosphate (MEP); Belongs to the DXR family.
  
  
 0.881
AHY46694.1
TIGR00054: RIP metalloprotease RseP; TIGRFAM:TIGR00054:Peptidase M50, putative membrane-associated zinc metallopeptidase; COG:COG0750: Predicted membrane-associated Zn-dependent proteases 1 [Cell envelope biogenesis outer membrane]; Pfam:PF02163:Peptidase M50; ProSiteProfiles:PS50106:PDZ domain; SMART:SM00228:PDZ domain; SUPERFAMILY:SSF50156:PDZ domain.
  
    0.826
pyrH
UMP kinase; Catalyzes the reversible phosphorylation of UMP to UDP.
 
  
 0.803
Your Current Organism:
Rubrobacter radiotolerans
NCBI taxonomy Id: 42256
Other names: ATCC 51242, Arthrobacter radiotolerans, CIP 106991, DSM 46359, DSM 5868, IAM 12072, IFO 14777, JCM 2153, NBRC 14777, R. radiotolerans, strain P-1
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