STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
AHY46726.1Nucleotidyl transferase; COG:COG1208: Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) [Cell envelope biogenesis outer membrane / Translation ribosomal structure and biogenesis]; Pfam:PF00483:Nucleotidyl transferase; SUPERFAMILY:SSF53448:No Description;Reactome: REACT_17015. (869 aa)    
Predicted Functional Partners:
AHY47733.1
Mannose-1-phosphate guanylyltransferase; COG:COG1208: Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) [Cell envelope biogenesis outer membrane / Translation ribosomal structure and biogenesis]; Pfam:PF00483:Nucleotidyl transferase; Pfam:PF00483:Nucleotidyl transferase; SUPERFAMILY:SSF53448:No Description.
 
 
0.964
AHY46847.1
Mannose-1-phosphate guanylyltransferase; COG:COG1208: Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) [Cell envelope biogenesis outer membrane / Translation ribosomal structure and biogenesis]; Pfam:PF00483:Nucleotidyl transferase; Pfam:PF00483:Nucleotidyl transferase; SUPERFAMILY:SSF53448:No Description.
 
 
0.939
AHY47990.1
COG:COG0662: Mannose-6-phosphate isomerase [Carbohydrate transport and metabolism]; Pfam:PF01050:Mannose-6-phosphate isomerase, type II, C-terminal; Pfam:PF01050:Mannose-6-phosphate isomerase, type II, C-terminal; SUPERFAMILY:SSF51182:RmlC-like cupin domain.
  
 
 0.929
AHY46412.1
COG:COG1109: Phosphomannomutase [Carbohydrate transport and metabolism]; Pfam:PF02878:Alpha-D-phosphohexomutase, alpha/beta/alpha domain I; Pfam:PF02878:Alpha-D-phosphohexomutase, alpha/beta/alpha domain I; PRINTS:PR00509:Alpha-D-phosphohexomutase superfamily; SUPERFAMILY:SSF53738:Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III.
  
 
 0.926
AHY46622.1
Sulfotransferase family; COG:COG3551: Uncharacterized protein conserved in bacteria [Function unknown]; Pfam:PF13469:Sulfotransferase family; SUPERFAMILY:SSF52540:P-loop containing nucleoside triphosphate hydrolase.
  
 
 0.846
AHY45742.1
TIGRFAM:TIGR03025:Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; COG:COG2148: Sugar transferases involved in lipopolysaccharide synthesis [Cell envelope biogenesis outer membrane]; Pfam:PF02397:Bacterial sugar transferase; EPS_sugtrans.
  
  
 0.829
AHY47001.1
TIGRFAM:TIGR03022:Undecaprenyl-phosphate galactose phosphotransferase, WbaP; COG:COG2148: Sugar transferases involved in lipopolysaccharide synthesis [Cell envelope biogenesis outer membrane]; Pfam:PF02397:Bacterial sugar transferase; WbaP_sugtrans.
  
  
 0.829
pgk
COG:COG0126: 3-phosphoglycerate kinase [Carbohydrate transport and metabolism]; Pfam:PF00162:Phosphoglycerate kinase; Hamap:MF_00145:Phosphoglycerate kinase; Pfam:PF00162:Phosphoglycerate kinase; PIRSF:PIRSF000724:Phosphoglycerate kinase; PRINTS:PR00477:Phosphoglycerate kinase; ProSitePatterns:PS00111:Phosphoglycerate kinase, conserved site; SUPERFAMILY:SSF53748:Phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family.
  
 
 0.803
AHY45513.1
rmlA: glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family.
  
  
0.798
AHY45514.1
rmlC: dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family.
  
 
 0.774
Your Current Organism:
Rubrobacter radiotolerans
NCBI taxonomy Id: 42256
Other names: ATCC 51242, Arthrobacter radiotolerans, CIP 106991, DSM 46359, DSM 5868, IAM 12072, IFO 14777, JCM 2153, NBRC 14777, R. radiotolerans, strain P-1
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