STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHY46734.1TIGRFAM:TIGR00518:Alanine dehydrogenase/pyridine nucleotide transhydrogenase; COG:COG0686: Alanine dehydrogenase [Amino acid transport and metabolism]; Pfam:PF01262:Alanine dehydrogenase/PNT, NAD(H)-binding domain; ProSitePatterns:PS00837:Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2; SMART:SM01002:Alanine dehydrogenase/PNT, NAD(H)-binding domain; SUPERFAMILY:SSF52283:No Description;KEGG: 00250; KEGG: 00430; KEGG: 00720; UniPathway: UPA00527. (377 aa)    
Predicted Functional Partners:
AHY45964.1
Alr: alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.
  
 
 0.934
AHY45625.1
TIGRFAM:TIGR00518:Alanine dehydrogenase/pyridine nucleotide transhydrogenase; COG:COG0686: Alanine dehydrogenase [Amino acid transport and metabolism]; Pfam:PF01262:Alanine dehydrogenase/PNT, NAD(H)-binding domain; PIRSF:PIRSF000183:Alanine dehydrogenase/pyridine nucleotide transhydrogenase; SMART:SM01002:Alanine dehydrogenase/PNT, NAD(H)-binding domain; SUPERFAMILY:SSF52283:No Description;KEGG: 00250; KEGG: 00430; KEGG: 00720; UniPathway: UPA00527; Belongs to the AlaDH/PNT family.
  
  
 
0.909
AHY45582.1
NAD/NADP transhydrogenase beta subunit; The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane; Belongs to the PNT beta subunit family.
      0.904
AHY47164.1
COG:COG2423: Predicted ornithine cyclodeaminase mu-crystallin homolog [Amino acid transport and metabolism]; Pfam:PF02423:Ornithine cyclodeaminase/mu-crystallin; Pfam:PF02423:Ornithine cyclodeaminase/mu-crystallin; PIRSF:PIRSF001439:Ornithine cyclodeaminase/mu-crystallin; SUPERFAMILY:SSF51735:No Description.
    
  0.902
AHY46731.1
TIGRFAM:TIGR00093:Pseudouridine synthase, RsuA/RluB/E/F; COG:COG1187: 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases [Translation ribosomal structure and biogenesis]; Pfam:PF00849:Pseudouridine synthase, RsuA/RluB/C/D/E/F; ProSitePatterns:PS01149:Pseudouridine synthase, RsuA/RluB/E/F, conserved site; ProSiteProfiles:PS50889:RNA-binding S4 domain; SMART:SM00363:RNA-binding S4 domain; SUPERFAMILY:SSF55120:Pseudouridine synthase, catalytic domain; Belongs to the pseudouridine synthase RsuA family.
       0.791
AHY46732.1
COG:COG1386: Predicted transcriptional regulator containing the HTH domain [Transcription]; Pfam:PF04079:Chromosome segregation/condensation protein ScpB, prokaryote; Pfam:PF04079:Chromosome segregation/condensation protein ScpB, prokaryote; PIRSF:PIRSF019345:Chromosome segregation/condensation protein ScpB, prokaryote; SUPERFAMILY:SSF46785:No Description.
       0.791
AHY46733.1
Hypothetical protein; COG:COG1354: Uncharacterized conserved protein [Function unknown].
       0.791
AHY46735.1
Pfam:PF12982:Protein of unknown function DUF3866.
       0.777
aroA
aroA: 3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate.
       0.773
AHY46736.1
Hypothetical Protein; Ab initio prediction:Prodigal:2.60.
       0.773
Your Current Organism:
Rubrobacter radiotolerans
NCBI taxonomy Id: 42256
Other names: ATCC 51242, Arthrobacter radiotolerans, CIP 106991, DSM 46359, DSM 5868, IAM 12072, IFO 14777, JCM 2153, NBRC 14777, R. radiotolerans, strain P-1
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