STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHY46798.1COG:COG0818: Diacylglycerol kinase [Cell envelope biogenesis outer membrane]; Pfam:PF01219:Diacylglycerol kinase, prokaryotic; Pfam:PF01219:Diacylglycerol kinase, prokaryotic; ProSitePatterns:PS01069:Diacylglycerol kinase, prokaryotic. (142 aa)    
Predicted Functional Partners:
ybeY
TIGR00043: probable rRNA maturation factor YbeY; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.
  
  
 0.941
AHY46692.1
COG:COG0575: CDP-diglyceride synthetase [Lipid metabolism]; Pfam:PF01148:Phosphatidate cytidylyltransferase; Pfam:PF01148:Phosphatidate cytidylyltransferase; ProSitePatterns:PS01315:Phosphatidate cytidylyltransferase; Belongs to the CDS family.
    
 0.914
AHY46728.1
COG:COG0204: 1-acyl-sn-glycerol-3-phosphate acyltransferase [Lipid metabolism]; Pfam:PF01553:Phospholipid/glycerol acyltransferase; Pfam:PF01553:Phospholipid/glycerol acyltransferase; SMART:SM00563:Phospholipid/glycerol acyltransferase; SUPERFAMILY:SSF69593:No Description.
    
 0.907
AHY46800.1
TIGRFAM:TIGR00277:Uncharacterised domain HDIG; COG:COG1480: Predicted membrane-associated HD superfamily hydrolase [General function prediction only]; Pfam:PF07697:Metal-dependent phosphohydrolase, 7TM extracellular domain; SMART:SM00471:HD/PDEase domain; SUPERFAMILY:SSF109604:No Description;KEGG: 00230; KEGG: 00240.
  
    0.806
AHY47742.1
COG:COG0578: Glycerol-3-phosphate dehydrogenase [Energy production and conversion]; Pfam:PF01266:FAD dependent oxidoreductase; Pfam:PF01266:FAD dependent oxidoreductase; PRINTS:PR01001:FAD-dependent glycerol-3-phosphate dehydrogenase; ProSitePatterns:PS00978:FAD-dependent glycerol-3-phosphate dehydrogenase; SUPERFAMILY:SSF51905:No Description.
    
  0.802
AHY47760.1
COG:COG0578: Glycerol-3-phosphate dehydrogenase [Energy production and conversion]; Pfam:PF01266:FAD dependent oxidoreductase; Pfam:PF01266:FAD dependent oxidoreductase; PRINTS:PR01001:FAD-dependent glycerol-3-phosphate dehydrogenase; SUPERFAMILY:SSF51905:No Description.
    
  0.802
AHY47755.1
Iron-containing alcohol dehydrogenase; COG:COG0371: Glycerol dehydrogenase and related enzymes [Energy production and conversion]; Pfam:PF13685:Iron-containing alcohol dehydrogenase; SUPERFAMILY:SSF56796:No Description.
     
  0.800
era
Era: GTP-binding protein Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism.
  
    0.781
AHY46801.1
COG:COG1702: Phosphate starvation-inducible protein PhoH predicted ATPase [Signal transduction mechanisms]; Pfam:PF02562:PhoH-like protein; Pfam:PF02562:PhoH-like protein; SMART:SM00322:K Homology domain; SUPERFAMILY:SSF52540:P-loop containing nucleoside triphosphate hydrolase.
  
  
 0.724
recO
Reco: DNA repair protein RecO; Involved in DNA repair and RecF pathway recombination.
  
  
 0.665
Your Current Organism:
Rubrobacter radiotolerans
NCBI taxonomy Id: 42256
Other names: ATCC 51242, Arthrobacter radiotolerans, CIP 106991, DSM 46359, DSM 5868, IAM 12072, IFO 14777, JCM 2153, NBRC 14777, R. radiotolerans, strain P-1
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