STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHY46817.1Rieske [2Fe-2S] domain; COG:COG2220: Predicted Zn-dependent hydrolases of the beta-lactamase fold [General function prediction only]; Pfam:PF00355:Rieske [2Fe-2S] iron-sulphur domain; ProSiteProfiles:PS51296:Rieske [2Fe-2S] iron-sulphur domain; SUPERFAMILY:SSF56281:No Description. (535 aa)    
Predicted Functional Partners:
AHY47345.1
Pyridine nucleotide-disulfide oxidoreductase; COG:COG1251: NAD(P)H-nitrite reductase [Energy production and conversion]; Pfam:PF07992:Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain; PRINTS:PR00368:FAD-dependent pyridine nucleotide-disulphide oxidoreductase; SUPERFAMILY:SSF51905:No Description.
  
 
 0.817
AHY47038.1
TIGRFAM:TIGR01469:Uroporphyrin-III C-methyltransferase; COG:COG0007: Uroporphyrinogen-III methylase [Coenzyme metabolism]; Pfam:PF02602:Tetrapyrrole biosynthesis, uroporphyrinogen III synthase; ProSitePatterns:PS00840:Uroporphiryn-III C-methyltransferase, conserved site; SUPERFAMILY:SSF53790:Tetrapyrrole methylase;KEGG: 00860; MetaCyc: PWY-5194; MetaCyc: PWY-5196; UniPathway: UPA00148; UniPathway: UPA00148; UniPathway: UPA00262; UniPathway: UPA00262; UniPathway: UPA00262; cobA_cysG_Cterm.
  
  
 0.776
AHY46816.1
COG:COG0769: UDP-N-acetylmuramyl tripeptide synthase [Cell envelope biogenesis outer membrane]; Pfam:PF08353:Domain of unknown function DUF1727; Pfam:PF08353:Domain of unknown function DUF1727; SUPERFAMILY:SSF53623:Mur ligase, central.
     
 0.684
AHY46980.1
Heavy metal translocating P-type ATPase; TIGRFAM:TIGR01525:Cation-transporting P-type ATPase, subfamily IB; COG:COG2217: Cation transport ATPase [Inorganic ion transport and metabolism]; Pfam:PF00122:P-type ATPase, A domain; PRINTS:PR00119:Cation-transporting P-type ATPase; ProSitePatterns:PS01047:Heavy-metal-associated, conserved site; ProSiteProfiles:PS50846:Heavy metal-associated domain, HMA; SUPERFAMILY:SSF56784:HAD-like domain; ATPase-IB_hvy.
  
 
 0.617
AHY45804.1
COG:COG0860: N-acetylmuramoyl-L-alanine amidase [Cell envelope biogenesis outer membrane]; Pfam:PF01520:Cell wall hydrolase/autolysin, catalytic; SMART:SM00646:Cell wall hydrolase/autolysin, catalytic; SUPERFAMILY:SSF53187:No Description.
 
    0.572
AHY46818.1
TIGRFAM:TIGR02210:Rod shape-determining protein RodA; COG:COG0772: Bacterial cell division membrane protein [Cell division and chromosome partitioning]; Pfam:PF01098:Cell cycle protein FtsW/RodA; rodA_shape; Belongs to the SEDS family.
     
 0.536
AHY47837.1
COG:COG0069: Glutamate synthase domain 2 [Amino acid transport and metabolism]; Pfam:PF01645:Glutamate synthase, central-C; ProSiteProfiles:PS51278:Glutamine amidotransferase type 2 domain; SUPERFAMILY:SSF51395:No Description;UniPathway: UPA00045.
  
  
 0.532
murG
UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily.
     
 0.524
AHY45857.1
TIGRFAM:TIGR01660:Nitrate reductase, beta subunit; COG:COG1140: Nitrate reductase beta subunit [Energy production and conversion]; Pfam:PF13247:4Fe-4S ferredoxin-type, iron-sulpur binding domain; ProSiteProfiles:PS51379:4Fe-4S ferredoxin-type, iron-sulpur binding domain; SUPERFAMILY:SSF54862:No Description;KEGG: 00910.
  
  
 0.519
AHY45607.1
COG:COG0446: Uncharacterized NAD(FAD)-dependent dehydrogenases [General function prediction only]; Pfam:PF07992:Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain; Pfam:PF07992:Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain; PRINTS:PR00368:FAD-dependent pyridine nucleotide-disulphide oxidoreductase; SUPERFAMILY:SSF51905:No Description.
  
 
 0.501
Your Current Organism:
Rubrobacter radiotolerans
NCBI taxonomy Id: 42256
Other names: ATCC 51242, Arthrobacter radiotolerans, CIP 106991, DSM 46359, DSM 5868, IAM 12072, IFO 14777, JCM 2153, NBRC 14777, R. radiotolerans, strain P-1
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