STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hpfyfiA: ribosomal subunit interface protein; Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and sometimes present during exponential growth. (188 aa)    
Predicted Functional Partners:
rpsF
S6: ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA.
    
   0.981
rpmC
TIGRFAM:TIGR00012:Ribosomal protein L29; COG:COG0255: Ribosomal protein L29 [Translation ribosomal structure and biogenesis]; Pfam:PF00831:Ribosomal protein L29; Hamap:MF_00374:Ribosomal protein L29; ProSitePatterns:PS00579:Ribosomal protein L29, conserved site; SUPERFAMILY:SSF46561:Ribosomal protein L29; Belongs to the universal ribosomal protein uL29 family.
  
 
 
 0.895
rpsI
COG:COG0103: Ribosomal protein S9 [Translation ribosomal structure and biogenesis]; Pfam:PF00380:Ribosomal protein S9; Hamap:MF_00532_B:Ribosomal protein S9, bacterial/plastid; Pfam:PF00380:Ribosomal protein S9; ProSitePatterns:PS00360:Ribosomal protein S9, conserved site; SUPERFAMILY:SSF54211:Ribosomal protein S5 domain 2-type fold; Belongs to the universal ribosomal protein uS9 family.
   
 
 0.893
rpmA
TIGRFAM:TIGR00062:Ribosomal protein L27; COG:COG0211: Ribosomal protein L27 [Translation ribosomal structure and biogenesis]; Pfam:PF01016:Ribosomal protein L27; Hamap:MF_00539:Ribosomal protein L27; PRINTS:PR00063:Ribosomal protein L27; ProSitePatterns:PS00831:Ribosomal protein L27, conserved site; SUPERFAMILY:SSF110324:Ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family.
   
 
 0.889
rplO
Ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family.
   
 
 0.884
rpmE2
TIGRFAM:TIGR00105:Ribosomal protein L31; COG:COG0254: Ribosomal protein L31 [Translation ribosomal structure and biogenesis]; Pfam:PF01197:Ribosomal protein L31; Hamap:MF_00502:Ribosomal protein L31 type B; PRINTS:PR01249:Ribosomal protein L31; ProSitePatterns:PS01143:Ribosomal protein L31; SUPERFAMILY:SSF143800:No Description.
  
 
 0.883
rpsB
TIGRFAM:TIGR01011:Ribosomal protein S2, bacteria/mitochondria/plastid; COG:COG0052: Ribosomal protein S2 [Translation ribosomal structure and biogenesis]; Pfam:PF00318:Ribosomal protein S2; Hamap:MF_00291_B:Ribosomal protein S2, bacteria/mitochondria/plastid; PRINTS:PR00395:Ribosomal protein S2; ProSitePatterns:PS00962:Ribosomal protein S2, conserved site; SUPERFAMILY:SSF52313:Ribosomal protein S2, flavodoxin-like domain; rpsB_bact; Belongs to the universal ribosomal protein uS2 family.
  
 
   0.878
rpsP
TIGRFAM:TIGR00002:Ribosomal protein S16; COG:COG0228: Ribosomal protein S16 [Translation ribosomal structure and biogenesis]; Pfam:PF00886:Ribosomal protein S16; Hamap:MF_00385:Ribosomal protein S16; SUPERFAMILY:SSF54565:Ribosomal protein S16 domain; Belongs to the bacterial ribosomal protein bS16 family.
    
 
 0.876
rpsE
Ribosomal protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family.
    
 
 0.876
rplI
L9: ribosomal protein L9; Binds to the 23S rRNA.
  
   0.875
Your Current Organism:
Rubrobacter radiotolerans
NCBI taxonomy Id: 42256
Other names: ATCC 51242, Arthrobacter radiotolerans, CIP 106991, DSM 46359, DSM 5868, IAM 12072, IFO 14777, JCM 2153, NBRC 14777, R. radiotolerans, strain P-1
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