STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHY46902.1COG:COG0146: N-methylhydantoinase B/acetone carboxylase alpha subunit [Amino acid transport and metabolism / Secondary metabolites biosynthesis transport and catabolism]; Pfam:PF02538:Hydantoinase B/oxoprolinase; Pfam:PF02538:Hydantoinase B/oxoprolinase. (626 aa)    
Predicted Functional Partners:
AHY46903.1
COG:COG0145: N-methylhydantoinase A/acetone carboxylase beta subunit [Amino acid transport and metabolism / Secondary metabolites biosynthesis transport and catabolism]; Pfam:PF01968:Hydantoinase/oxoprolinase; Pfam:PF01968:Hydantoinase/oxoprolinase; SUPERFAMILY:SSF53067:No Description.
 0.999
AHY47769.1
COG:COG0145: N-methylhydantoinase A/acetone carboxylase beta subunit [Amino acid transport and metabolism / Secondary metabolites biosynthesis transport and catabolism]; Pfam:PF01968:Hydantoinase/oxoprolinase; Pfam:PF01968:Hydantoinase/oxoprolinase; SUPERFAMILY:SSF53067:No Description.
 0.999
AHY47768.1
COG:COG0146: N-methylhydantoinase B/acetone carboxylase alpha subunit [Amino acid transport and metabolism / Secondary metabolites biosynthesis transport and catabolism]; Pfam:PF02538:Hydantoinase B/oxoprolinase; Pfam:PF02538:Hydantoinase B/oxoprolinase.
  
  
 
0.922
AHY46901.1
Isochorismatase family; COG:COG1335: Amidases related to nicotinamidase [Secondary metabolites biosynthesis transport and catabolism]; Pfam:PF00857:Isochorismatase-like; SUPERFAMILY:SSF52499:Isochorismatase-like.
 
     0.820
AHY46906.1
COG:COG1802: Transcriptional regulators [Transcription]; Pfam:PF07729:GntR, C-terminal; Pfam:PF07729:GntR, C-terminal; PRINTS:PR00035:Transcription regulator HTH, GntR; ProSiteProfiles:PS50949:Transcription regulator HTH, GntR; SMART:SM00895:GntR, C-terminal; SUPERFAMILY:SSF48008:Fatty acid responsive transcription factor FadR, C-terminal.
       0.523
AHY46904.1
HMGL-like; COG:COG0119: Isopropylmalate/homocitrate/citramalate synthases [Amino acid transport and metabolism]; Pfam:PF00682:Pyruvate carboxyltransferase; ProSiteProfiles:PS50991:Pyruvate carboxyltransferase; SUPERFAMILY:SSF51569:No Description.
       0.522
AHY46905.1
COG:COG1804: Predicted acyl-CoA transferases/carnitine dehydratase [Energy production and conversion]; Pfam:PF02515:CoA-transferase family III; Pfam:PF02515:CoA-transferase family III; SUPERFAMILY:SSF89796:CoA-transferase family III domain; Belongs to the CoA-transferase III family.
       0.522
Your Current Organism:
Rubrobacter radiotolerans
NCBI taxonomy Id: 42256
Other names: ATCC 51242, Arthrobacter radiotolerans, CIP 106991, DSM 46359, DSM 5868, IAM 12072, IFO 14777, JCM 2153, NBRC 14777, R. radiotolerans, strain P-1
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.